HHsearch alignment for GI: 254781086 and conserved domain: PRK00409
>PRK00409 recombination and DNA strand exchange inhibitor protein; Reviewed.
Probab=96.36 E-value=0.086 Score=30.98 Aligned_cols=121 Identities=14% Similarity=0.167 Sum_probs=64.6
Q ss_pred CCCCCCCCHHHHHHHH--HHHHHHHHHHHHHHHHHHHHH-H----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 6899885988768899--999999999999999995540-8----99999999999999999999999999999999999
Q gi|254781086|r 10 SSRFPPFDTSTFLSQF--FWLAIIFGIFYWVTHRFILPR-L----SSIMEVRRNLISSDQEKMDSAKREVESMISSYEES 82 (176)
Q Consensus 10 ~~gmpqld~~~f~~q~--fw~~I~F~il~~il~~~~~~p-i----~~~l~~R~~~I~~~l~~A~~~~~eae~~~~~~e~~ 82 (176)
T Consensus 462 nas~-~FD~~tl~PtYrl~~G~pG~S~A~~IA~rlGlp~~ii~~A~~~l~~~~~~~~~li~~l~~~~~~~e~~~~~~~~~ 540 (780)
T PRK00409 462 NASV-EFDEETLRPTYRLLIGIPGRSNAFEIAKRLGLPPNIIEEAKKVYGEDKEKLNELIASLEELERELEEKAEEAEKL 540 (780)
T ss_pred EEEE-EECCCCCCCCEEEECCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9888-874023786068705999763699999992979999999998856316589999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999999999999999999
Q gi|254781086|r 83 LAIARAHAKEIIDKVVAAAEQNLEFQREVFEKDLLHKLSNAQNEIDDMQK 132 (176)
Q Consensus 83 l~eak~ea~~ii~~a~~~a~~~~e~~~~~a~~ei~~~~~~a~~~I~~~k~ 132 (176)
T Consensus 541 ~~e~~~~~~~l-~~~~~~l~~~~~~~~~~~~~ea~~~i~~a~~e~~~~i~ 589 (780)
T PRK00409 541 LKEAEKLKEEL-EEQKEKLQEREDKLLLEAEEEAQQAIKEAKKEAAEIIK 589 (780)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999-99999999999999999999999999999999999999