HHsearch alignment for GI: 254781086 and conserved domain: PRK00409

>PRK00409 recombination and DNA strand exchange inhibitor protein; Reviewed.
Probab=96.36  E-value=0.086  Score=30.98  Aligned_cols=121  Identities=14%  Similarity=0.167  Sum_probs=64.6

Q ss_pred             CCCCCCCCHHHHHHHH--HHHHHHHHHHHHHHHHHHHHH-H----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             6899885988768899--999999999999999995540-8----99999999999999999999999999999999999
Q gi|254781086|r   10 SSRFPPFDTSTFLSQF--FWLAIIFGIFYWVTHRFILPR-L----SSIMEVRRNLISSDQEKMDSAKREVESMISSYEES   82 (176)
Q Consensus        10 ~~gmpqld~~~f~~q~--fw~~I~F~il~~il~~~~~~p-i----~~~l~~R~~~I~~~l~~A~~~~~eae~~~~~~e~~   82 (176)
T Consensus       462 nas~-~FD~~tl~PtYrl~~G~pG~S~A~~IA~rlGlp~~ii~~A~~~l~~~~~~~~~li~~l~~~~~~~e~~~~~~~~~  540 (780)
T PRK00409        462 NASV-EFDEETLRPTYRLLIGIPGRSNAFEIAKRLGLPPNIIEEAKKVYGEDKEKLNELIASLEELERELEEKAEEAEKL  540 (780)
T ss_pred             EEEE-EECCCCCCCCEEEECCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             9888-874023786068705999763699999992979999999998856316589999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99999999999999999999999999999999999999999999999999
Q gi|254781086|r   83 LAIARAHAKEIIDKVVAAAEQNLEFQREVFEKDLLHKLSNAQNEIDDMQK  132 (176)
Q Consensus        83 l~eak~ea~~ii~~a~~~a~~~~e~~~~~a~~ei~~~~~~a~~~I~~~k~  132 (176)
T Consensus       541 ~~e~~~~~~~l-~~~~~~l~~~~~~~~~~~~~ea~~~i~~a~~e~~~~i~  589 (780)
T PRK00409        541 LKEAEKLKEEL-EEQKEKLQEREDKLLLEAEEEAQQAIKEAKKEAAEIIK  589 (780)
T ss_pred             HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99999999999-99999999999999999999999999999999999999