HHsearch alignment for GI: 254781086 and conserved domain: PRK06328

>PRK06328 type III secretion system protein; Validated.
Probab=96.53  E-value=0.068  Score=31.62  Aligned_cols=101  Identities=11%  Similarity=0.072  Sum_probs=56.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q gi|254781086|r   74 SMISSYEESLAIARAHAKEIIDKVVAAAEQNLEFQREVFEKDLLHKLSNAQNEIDDMQKKASQEVYSIVGEVTKDLVRKL  153 (176)
Q Consensus        74 ~~~~~~e~~l~eak~ea~~ii~~a~~~a~~~~e~~~~~a~~ei~~~~~~a~~~I~~~k~~a~~ei~~~a~~~a~~i~~kl  153 (176)
T Consensus        26 ~~~~~A~eilE~Ak~~Ae~~~~ea~~e~e~~~eea~~~G~~eG~~~~~~~la~~~~e~~~~~~~~e~~lv~lvl~aarKI  105 (223)
T PRK06328         26 SALLDAKELLEKTKEDSEAYTQETHEECAELREEAKNQGFKEGSEAWSKQLAFLEKETQALRIQVKEALVPLAIASVKKI  105 (223)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99874999999999999999999999999999999998899999999999999999999999999999999999999999


Q ss_pred             -HHH--CCHHHHHHHHHHHHHHHH
Q ss_conf             -841--599999999999994210
Q gi|254781086|r  154 -GFS--VSDADVQKILDRKRDGID  174 (176)
Q Consensus       154 -~~~--~~~~~~~~~i~~~~~~i~  174 (176)
T Consensus       106 Ig~el~~~pe~vl~iVr~aL~~vr  129 (223)
T PRK06328        106 IGKELELHPETIVSIISEALKELT  129 (223)
T ss_pred             HHHHHHCCHHHHHHHHHHHHHHHH
T ss_conf             888876088999999999999986