HHsearch alignment for GI: 254781086 and conserved domain: PRK09098

>PRK09098 type III secretion system protein HrpB; Validated.
Probab=92.08  E-value=0.96  Score=24.50  Aligned_cols=97  Identities=18%  Similarity=0.173  Sum_probs=52.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHH---HHHHHHHHHHHHHHH
Q ss_conf             99999999999999999999999999999999999999999999999--------9999999---999999999999999
Q gi|254781086|r   72 VESMISSYEESLAIARAHAKEIIDKVVAAAEQNLEFQREVFEKDLLH--------KLSNAQN---EIDDMQKKASQEVYS  140 (176)
Q Consensus        72 ae~~~~~~e~~l~eak~ea~~ii~~a~~~a~~~~e~~~~~a~~ei~~--------~~~~a~~---~I~~~k~~a~~ei~~  140 (176)
T Consensus        34 ~~~~~~~~~~~L~~Ar~eA~~Il~~Ar~~A~~I~~~Ar~e~e~a~~~GY~eG~~ral~e~~~r~a~~~~~~~~~~~~m~~  113 (229)
T PRK09098         34 LAAVHAERDAVLAAARDRAERIAAEARAQAEALLEDARREADRSARLGYAAGLRQALAEWHARGADHAFAERRAARRMRE  113 (229)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99999989999999999999999999999999999999999999998899999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHCCHH-HHHHHHHH
Q ss_conf             99999999999998415999-99999999
Q gi|254781086|r  141 IVGEVTKDLVRKLGFSVSDA-DVQKILDR  168 (176)
Q Consensus       141 ~a~~~a~~i~~kl~~~~~~~-~~~~~i~~  168 (176)
T Consensus       114 rLa~iV~~AVekIv~~e~~~aL~~ra~~~  142 (229)
T PRK09098        114 RLAEIVAAAVEQIVHGEDPAALFARAAQT  142 (229)
T ss_pred             HHHHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_conf             99999999999999713988899999999