HHsearch alignment for GI: 254781086 and conserved domain: PRK13454
>PRK13454 F0F1 ATP synthase subunit B'; Provisional.
Probab=100.00 E-value=2.1e-42 Score=281.79 Aligned_cols=170 Identities=23% Similarity=0.416 Sum_probs=165.5
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 56453346899885988768899999999999999999995540899999999999999999999999999999999999
Q gi|254781086|r 3 SSSSSDFSSRFPPFDTSTFLSQFFWLAIIFGIFYWVTHRFILPRLSSIMEVRRNLISSDQEKMDSAKREVESMISSYEES 82 (176)
Q Consensus 3 ~~~~~~~~~gmpqld~~~f~~q~fw~~I~F~il~~il~~~~~~pi~~~l~~R~~~I~~~l~~A~~~~~eae~~~~~~e~~ 82 (176)
T Consensus 12 ~~~~~~~~~GmPQld~~~f~sQiFWl~i~F~ily~vl~k~~lPrI~~vLe~R~~~I~~dL~~Ae~~k~eAe~~~~~ye~~ 91 (181)
T PRK13454 12 AADAAASAPGMPQLDFDTFPNQIFWLLVTLVAIYFVLTRVALPRIGAVLAERQGTITNDLAAAEELKQKAVEAEKAYNKA 91 (181)
T ss_pred HHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 76503457999999902407899999999999999999999988898999999999988999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
Q ss_conf 99999999999999999999999999999999999999999999999999999999999999999999999841599999
Q gi|254781086|r 83 LAIARAHAKEIIDKVVAAAEQNLEFQREVFEKDLLHKLSNAQNEIDDMQKKASQEVYSIVGEVTKDLVRKLGFSVSDADV 162 (176)
Q Consensus 83 l~eak~ea~~ii~~a~~~a~~~~e~~~~~a~~ei~~~~~~a~~~I~~~k~~a~~ei~~~a~~~a~~i~~kl~~~~~~~~~ 162 (176)
T Consensus 92 L~~Ar~eA~~ii~eAr~~a~~~~~~~~~~a~~el~~~i~~AE~~I~~~K~~Am~~i~~iA~d~a~~Iv~kL~gk~~~~~v 171 (181)
T PRK13454 92 LADARAEAQRIVAETRAEIQAELDVAIAKADAEIAAKAAESEKRIAEIRAGALESVEEVAKDTAEALVAALGGKADAAAV 171 (181)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
T ss_conf 99999999999999999999999999999999999999999999999999889999999999999999998575877889
Q ss_pred HHHHHHHHHH
Q ss_conf 9999999942
Q gi|254781086|r 163 QKILDRKRDG 172 (176)
Q Consensus 163 ~~~i~~~~~~ 172 (176)
T Consensus 172 ~aaV~~~~k~ 181 (181)
T PRK13454 172 DAAVAQRMKG 181 (181)
T ss_pred HHHHHHHHCC
T ss_conf 9999987477