HHsearch alignment for GI: 254781086 and conserved domain: PRK13455
>PRK13455 F0F1 ATP synthase subunit B; Provisional.
Probab=100.00 E-value=2.6e-31 Score=213.30 Aligned_cols=169 Identities=18% Similarity=0.304 Sum_probs=160.2
Q ss_pred CCCCCCCCCCCCCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9756453346899885-98876889999999999999999999554-089999999999999999999999999999999
Q gi|254781086|r 1 MASSSSSDFSSRFPPF-DTSTFLSQFFWLAIIFGIFYWVTHRFILP-RLSSIMEVRRNLISSDQEKMDSAKREVESMISS 78 (176)
Q Consensus 1 ~~~~~~~~~~~gmpql-d~~~f~~q~fw~~I~F~il~~il~~~~~~-pi~~~l~~R~~~I~~~l~~A~~~~~eae~~~~~ 78 (176)
T Consensus 10 ~~~~~~~~~~~~~~~~~d~~------FWv~IsFvif~~iL~~~~vp~~I~~~LD~R~~~I~~dLdeAe~lreEAe~lLae 83 (184)
T PRK13455 10 LVASPALAAGGPFFSLSNTD------FIVTLAFLLFIGILVYFKVPGMIGGMLDKRAEGIRSELEEARALREEAQTLLAS 83 (184)
T ss_pred HHCCHHHHCCCCCCCCCCCH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 96286876479988888954------999999999999999995589999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHC
Q ss_conf 999999999999999999999999999999999999999999999999999999999999999999999999999-8415
Q gi|254781086|r 79 YEESLAIARAHAKEIIDKVVAAAEQNLEFQREVFEKDLLHKLSNAQNEIDDMQKKASQEVYSIVGEVTKDLVRKL-GFSV 157 (176)
Q Consensus 79 ~e~~l~eak~ea~~ii~~a~~~a~~~~e~~~~~a~~ei~~~~~~a~~~I~~~k~~a~~ei~~~a~~~a~~i~~kl-~~~~ 157 (176)
T Consensus 84 ye~~l~~A~~EA~~Ii~~Ak~~A~~~~~~~~~~a~~~i~r~~~~Ae~~I~~~k~~A~~eir~~a~~lAi~aA~kii~~~l 163 (184)
T PRK13455 84 YERKQREVQEQADRIVANARDEAQAAAEQAKADLEASIARRLAAAEDQIASAEAAAVRAVRDRAISVAVAAAADVIAKQM 163 (184)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 99999999999999999999999999999999999999999999999999999999988889999999999999998657
Q ss_pred CHHHHHHHHHHHHHHHHC
Q ss_conf 999999999999942106
Q gi|254781086|r 158 SDADVQKILDRKRDGIDA 175 (176)
Q Consensus 158 ~~~~~~~~i~~~~~~i~~ 175 (176)
T Consensus 164 ~~~~~~~LId~~I~el~~ 181 (184)
T PRK13455 164 TAAEANALIDEAIKEVEA 181 (184)
T ss_pred CHHHHHHHHHHHHHHHHH
T ss_conf 999899999999999976