HHsearch alignment for GI: 254781086 and conserved domain: PRK13461
>PRK13461 F0F1 ATP synthase subunit B; Provisional.
Probab=99.97 E-value=3.9e-28 Score=193.71 Aligned_cols=156 Identities=17% Similarity=0.227 Sum_probs=149.1
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 85988768899999999999999999995540899999999999999999999999999999999999999999999999
Q gi|254781086|r 15 PFDTSTFLSQFFWLAIIFGIFYWVTHRFILPRLSSIMEVRRNLISSDQEKMDSAKREVESMISSYEESLAIARAHAKEII 94 (176)
Q Consensus 15 qld~~~f~~q~fw~~I~F~il~~il~~~~~~pi~~~l~~R~~~I~~~l~~A~~~~~eae~~~~~~e~~l~eak~ea~~ii 94 (176)
T Consensus 2 ~in~~t----~i~q~inF~il~~il~kf~~~pi~~~l~~R~~~I~~~l~~Ae~~~~ea~~~~~e~e~~L~~a~~ea~~Ii 77 (159)
T PRK13461 2 EINIPT----IIATIINFIILLLILKHFFFDKIKAVIDSRQSEIDEKIEKADEDAEKARELKLKNERILKSAKEEGKKIV 77 (159)
T ss_pred CCCHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 785999----9999999999999999997888999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHCCHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999999999999999999999999999-84159999999999999421
Q gi|254781086|r 95 DKVVAAAEQNLEFQREVFEKDLLHKLSNAQNEIDDMQKKASQEVYSIVGEVTKDLVRKL-GFSVSDADVQKILDRKRDGI 173 (176)
Q Consensus 95 ~~a~~~a~~~~e~~~~~a~~ei~~~~~~a~~~I~~~k~~a~~ei~~~a~~~a~~i~~kl-~~~~~~~~~~~~i~~~~~~i 173 (176)
T Consensus 78 ~~A~~~A~~~~~~i~~~A~~ea~~i~~~A~~~Ie~e~~~a~~el~~ev~~la~~~A~kil~~~ld~~~~~~lid~~i~el 157 (159)
T PRK13461 78 EEYKSKAENVYEEIVKEAHEEAESIIERAKLEIQREKEKAEYEIKNQAVDLAVLLSSKALEESIDESEHRELIKDFISKV 157 (159)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHC
T ss_conf 99999999999999999999999999999999999999999999999999999999999987759998999999999785
Q ss_pred H
Q ss_conf 0
Q gi|254781086|r 174 D 174 (176)
Q Consensus 174 ~ 174 (176)
T Consensus 158 G 158 (159)
T PRK13461 158 G 158 (159)
T ss_pred C
T ss_conf 8