HHsearch alignment for GI: 254781086 and conserved domain: TIGR03321
>TIGR03321 alt_F1F0_F0_B alternate F1F0 ATPase, F0 subunit B. CC and in principle may run in either direction. This model represents the F0 subunit B of this apparent second ATP synthase.
Probab=97.29 E-value=0.015 Score=35.60 Aligned_cols=96 Identities=15% Similarity=0.156 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHH----HHHHHHHHHH
Q ss_conf 9999999999999955408---999999999999999999999999999999999----9999999----9999999999
Q gi|254781086|r 29 AIIFGIFYWVTHRFILPRL---SSIMEVRRNLISSDQEKMDSAKREVESMISSYE----ESLAIAR----AHAKEIIDKV 97 (176)
Q Consensus 29 ~I~F~il~~il~~~~~~pi---~~~l~~R~~~I~~~l~~A~~~~~eae~~~~~~e----~~l~eak----~ea~~ii~~a 97 (176)
T Consensus 16 liL~~lL~rFl~~Pv~~~i~~R~~~I~~~l~~A~~~~~eA~~~~~~~e~~~~~~~~e~~~~l~~A~~eAe~er~~ll~~A 95 (246)
T TIGR03321 16 LILVWLLKRFLYRPILDAMDAREKKIAGELADADTKKREAEQERREYEEKNEELDQQREVLLTKAKEEAQAERQRLLDEA 95 (246)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999996889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999999999999999999
Q gi|254781086|r 98 VAAAEQNLEFQREVFEKDLLHKLSNAQ 124 (176)
Q Consensus 98 ~~~a~~~~e~~~~~a~~ei~~~~~~a~ 124 (176)
T Consensus 96 r~eae~~r~~~~~~l~~E~~~~~~~l~ 122 (246)
T TIGR03321 96 REEADEIREKWQEALRREQAALSDELR 122 (246)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999999999999999