HHSEARCH alignment of GI: 254781086 and SCOP domain: d1l2pa_

Alignment

Probab=96.19  E-value=0.034  Score=30.68  Aligned_cols=57  Identities=16%  Similarity=0.164  Sum_probs=50.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             999999999999999999999999999999999999999999999999999999999
Q gi|254781086|r   71 EVESMISSYEESLAIARAHAKEIIDKVVAAAEQNLEFQREVFEKDLLHKLSNAQNEI  127 (176)
Q Consensus        71 eae~~~~~~e~~l~eak~ea~~ii~~a~~~a~~~~e~~~~~a~~ei~~~~~~a~~~I  127 (176)
                      .......+....+..|+..+..|+++++..+....+..+..++.+++..+..+...+
T Consensus         3 ~L~eAK~eAa~Ii~qA~~ra~qIveeak~~A~~Ea~rI~~~A~~eIe~E~~~A~~eL   59 (61)
T d1l2pa_           3 QLKKAKAEAQVIIEQANKRRSQILDEAKAEAEQERTKIVAQAQAEIEAERKRAREEL   59 (61)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             779999999999999998899999999999999999999989999999999999975

SCOP domain information

class: Membrane and cell surface proteins and peptides
fold: Single transmembrane helix
superfamily: F1F0 ATP synthase subunit B, membrane domain
family: F1F0 ATP synthase subunit B, membrane domain
domain: F1F0 ATP synthase subunit B, membrane domain
species: Escherichia coli [TaxId: 562]