RPSBLAST alignment of GI: 254781086 and protein with PDBid: 2cly

>2cly_A ATP synthase B chain, mitochondrial; mitochondrion, ION transport, CF(0), stator, transport, acetylation, hydrogen ION transport; 2.8A {Bos taurus} SCOP: f.52.1.1 Length = 214

 Score = 75.7 bits (186), Expect = 6e-15
 Identities = 16/147 (10%), Positives = 42/147 (28%), Gaps = 3/147 (2%)

Query: 22  LSQFFWLAIIFGIFYWVTHRFILPRLSSIMEVRRNLISSDQEKMDSAKREVESMISSYEE 81
           ++   + AI    F     +     +    +       +  E++  A  +        E+
Sbjct: 53  ITPETFSAISTIGFLVYIVKKYGASVGEFADKLNEQKIAQLEEVKQASIKQIQDAIDMEK 112

Query: 82  SLAIARAHAKEIIDKVVAAAEQNLEFQREVFEKDLLHKLSNAQNEIDDMQKKASQEVYSI 141
           S          + D         LE         +  ++ N  +    +Q    Q+    
Sbjct: 113 SQQALVQKRHYLFDVQRNNIAMALEVTYRERLHRVYREVKNRLDYHISVQNMMRQKEQEH 172

Query: 142 VGEVTKDLVRKLGFSVSDADVQKILDR 168
           +    +  V +   S+S    ++ + +
Sbjct: 173 MINWVEKRVVQ---SISAQQEKETIAK 196