HHsearch alignment for GI: 254781087 and conserved domain: CHL00061
>CHL00061 atpH ATP synthase CF0 C subunit.
Probab=99.90 E-value=6.7e-24 Score=140.21 Aligned_cols=74 Identities=24% Similarity=0.279 Sum_probs=71.6
Q ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 599999999999999-99874789999999999999823787898799999999999999999999999999970
Q gi|254781087|r 17 YYSLAAKYVAVGMAC-LGMGLVALAVSNIFTTYLSGAFRNPCAASAHKTEVLIFAVIAESLGLFLLLVVMLLLFV 90 (91)
Q Consensus 17 ~~a~aak~IGAGlA~-ig~~G~giGiG~if~~~i~~vaRNP~~~~~l~~~~ilG~Al~Ea~glfalviA~lllFa 90 (91)
T Consensus 3 ~iv~~~s~l~Agl~~glaaiG~giG~G~a~~~a~e~iaRqPea~g~i~~tm~ig~A~iEs~~Iy~lvialillFA 77 (81)
T CHL00061 3 PLISAASVIAAGLAVGLASIGPGVGQGTAAGQAVEGIARQPEAEGKIRGTLLLSLAFMEALTIYGLVVALALLFA 77 (81)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 399999999999999998313246587999999999874920102169999999999999999999999999953