HHsearch alignment for GI: 254781088 and conserved domain: MTH00132
>MTH00132 ATP6 ATP synthase F0 subunit 6; Provisional.
Probab=100.00 E-value=0 Score=345.78 Aligned_cols=227 Identities=27% Similarity=0.430 Sum_probs=195.6
Q ss_pred CCCCCHHHHCCCCEEEEEECCEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 98764467312450001424834641089999999999999999983146553788640356778875678775205766
Q gi|254781088|r 1 MSKSPMSQFIVQKIVPIQVQGFDLSFTNSSLAMLVSLLVIFIFAFFAVSNCRVVPTRLQSFFEIIYQFIMSTLCDSAGNQ 80 (250)
Q Consensus 1 m~~sP~~~f~~~~l~~~~i~~~~~~it~~~l~~~i~~~il~~~~~~~~~~~~~vP~~~q~~~E~i~~~i~~~v~~~~g~~ 80 (250)
T Consensus 1 M~~nlF~qF~~~~~~~~-------~-----l-~~~~~~~--~~~l~~~~~~~~~~~r~~~l~~~~~~~~~~~~~~~~~~~ 65 (227)
T MTH00132 1 MTLSFFDQFMSPTFLGI-------P-----L-IALALTL--PWILFPTPTSRWLNNRLLTLQGWFINRFTQQLLLPLNVG 65 (227)
T ss_pred CCCCHHCCCCCCHHHHH-------H-----H-HHHHHHH--HHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 95312054579176248-------8-----9-9999999--999988231756445999999999999999998635877
Q ss_pred CCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 75302589999998512323230124544310355421467999999999998415864211138999987543023335
Q gi|254781088|r 81 SKNFFPFVFSLFVFLTTANLLGLHPYLFSFTSQIVVTTSFSLLVVLSVVISGFYVNGLGFLRLFIPKDIPLLIKPLVCFI 160 (250)
Q Consensus 81 ~~~~~p~i~TlF~fIl~~NllGLiP~~~~~Ta~l~~t~~lal~~~~~~~~~g~~~~g~~~~~~~~~~g~p~~l~p~~~~i 160 (250)
T Consensus 66 g~k~~p~l~slF~fIl~~NllGLiPy~ft~Tshl~~tl~LAl~~wl~~~i~G~~~~~~~~l~h~~P~GtP~~L~P~lv~I 145 (227)
T MTH00132 66 GHKWALLLTSLMLFLITLNMLGLLPYTFTPTTQLSLNMGLAVPLWLATVIIGMRNQPTHALGHLLPEGTPTPLIPVLIII 145 (227)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHH
T ss_conf 88669999999999999999870287778548899999999999999999999982488999966875513899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 67765441333335777877768999999999999999878899999999999999999999999999999999999999
Q gi|254781088|r 161 EVSSFLFRPVSLSLRLFANMLAGHLMLKVFAGFSTSMMSIGMLGIAFSFLPVLANVAVTGLEFFVAFMQAYIFMVLACVY 240 (250)
Q Consensus 161 E~is~~~rp~sLs~RLfgNi~aG~iil~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~v~~iQAyVF~~Lt~~Y 240 (250)
T Consensus 146 E~iS~~iRP~sL~vRL~ANm~AGHlll~ll~~~~~~l~~~~---~~~~~l~~~~~~~l~~LE~~Va~IQAYVF~lL~~lY 222 (227)
T MTH00132 146 ETISLFIRPLALGVRLTANLTAGHLLIQLIATAAFVLLPLM---PTVAILTATLLFLLTLLEVAVAMIQAYVFVLLLSLY 222 (227)
T ss_pred HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99987202278779999999981999999999999999999---999999999999999999999999999999999998
Q ss_pred HHHHC
Q ss_conf 73340
Q gi|254781088|r 241 IGDVY 245 (250)
Q Consensus 241 i~~a~ 245 (250)
T Consensus 223 i~e~i 227 (227)
T MTH00132 223 LQENV 227 (227)
T ss_pred HHCCC
T ss_conf 71519