HHsearch alignment for GI: 254781088 and conserved domain: MTH00172
>MTH00172 ATP6 ATP synthase F0 subunit 6; Provisional.
Probab=100.00 E-value=0 Score=406.17 Aligned_cols=232 Identities=36% Similarity=0.659 Sum_probs=211.2
Q ss_pred CCCCCHHHHCCCCEEEEEECCEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 98764467312450001424834641089999999999999999983146553788640356778875678775205766
Q gi|254781088|r 1 MSKSPMSQFIVQKIVPIQVQGFDLSFTNSSLAMLVSLLVIFIFAFFAVSNCRVVPTRLQSFFEIIYQFIMSTLCDSAGNQ 80 (250)
Q Consensus 1 m~~sP~~~f~~~~l~~~~i~~~~~~it~~~l~~~i~~~il~~~~~~~~~~~~~vP~~~q~~~E~i~~~i~~~v~~~~g~~ 80 (250)
T Consensus 1 m~~~~f~~f~~~~~l---------~it~s~l~m~l~~----~~~~~~~r~~~~vP~r~Q~~~E~i~~~v~~~v~~~ig~~ 67 (232)
T MTH00172 1 MSSSYFDQFNVVWLI---------GLTNSSIMMILVV----IVVLLLFKGIQLIPKRWQSIIELIYDHFHGVVKDNLGNE 67 (232)
T ss_pred CCHHHCCCCCCCHHH---------HHHHHHHHHHHHH----HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 957651677771747---------2028999999999----999998589882460999999999999999999763888
Q ss_pred CCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 75302589999998512323230124544310355421467999999999998415864211138999987543023335
Q gi|254781088|r 81 SKNFFPFVFSLFVFLTTANLLGLHPYLFSFTSQIVVTTSFSLLVVLSVVISGFYVNGLGFLRLFIPKDIPLLIKPLVCFI 160 (250)
Q Consensus 81 ~~~~~p~i~TlF~fIl~~NllGLiP~~~~~Ta~l~~t~~lal~~~~~~~~~g~~~~g~~~~~~~~~~g~p~~l~p~~~~i 160 (250)
T Consensus 68 ~~k~~P~i~tlF~fIl~~Nl~GliP~~~~~Ts~~~~t~~lal~~~~~~~~~G~~~~~~~~~~~~~P~G~p~~l~Pll~~i 147 (232)
T MTH00172 68 GLKYFPFIISLFFFIVFLNVLGLFPYVFTPTVHIVVTLGLSFSIIIGVTLAGLWRFKWDFFSILMPSGAPLGLAPLLVLI 147 (232)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCHHHHHHHHHH
T ss_conf 86329999999999999999874766408412199899999999999999999965501000347899609999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 67765441333335777877768999999999999999878899999999999999999999999999999999999999
Q gi|254781088|r 161 EVSSFLFRPVSLSLRLFANMLAGHLMLKVFAGFSTSMMSIGMLGIAFSFLPVLANVAVTGLEFFVAFMQAYIFMVLACVY 240 (250)
Q Consensus 161 E~is~~~rp~sLs~RLfgNi~aG~iil~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~v~~iQAyVF~~Lt~~Y 240 (250)
T Consensus 148 E~is~~~RpiSL~lRLfaNm~AGhlll~l~~~~~~~~~~~~---~~~~~~~~~~~~~~~~lEl~V~~iQAYVF~lLt~vY 224 (232)
T MTH00172 148 ETVSYISRAISLGVRLAANLSAGHLLFAILAGFGFNMLVAG---GLVGLFPLLIMVFITLLEVAVAVIQAYVFCLLTTIY 224 (232)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999987879999999999887999999999999999988---999999999999999999999999999999999999
Q ss_pred HHHHCCCC
Q ss_conf 73340103
Q gi|254781088|r 241 IGDVYRSD 248 (250)
Q Consensus 241 i~~a~~~~ 248 (250)
T Consensus 225 i~~av~~H 232 (232)
T MTH00172 225 LADTIVLH 232 (232)
T ss_pred HHHHHHCC
T ss_conf 98666339