HHsearch alignment for GI: 254781088 and conserved domain: PRK13416
>PRK13416 consensus.
Probab=100.00 E-value=0 Score=436.74 Aligned_cols=246 Identities=29% Similarity=0.514 Sum_probs=225.9
Q ss_pred CCCHHHHCCCCEEEEEECCEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH-HHHCCC-C
Q ss_conf 76446731245000142483464108999999999999999998314655378864035677887567877-520576-6
Q gi|254781088|r 3 KSPMSQFIVQKIVPIQVQGFDLSFTNSSLAMLVSLLVIFIFAFFAVSNCRVVPTRLQSFFEIIYQFIMSTL-CDSAGN-Q 80 (250)
Q Consensus 3 ~sP~~~f~~~~l~~~~i~~~~~~it~~~l~~~i~~~il~~~~~~~~~~~~~vP~~~q~~~E~i~~~i~~~v-~~~~g~-~ 80 (250)
T Consensus 16 ~p~le~F~~~~~~~~~~~~~~~s~tn~~l~~~l~~~~i~~f~~~~~r~~~lVP~~~Q~~~E~~~~Fv~~~i~~~~iG~k~ 95 (268)
T PRK13416 16 PPGLDVFLPPAWFEWGGGDVNFYFNKPMLLVLLSVVFVAGFFWLAFRKPKLVPGGLQNAGESAYDFVRNQIAKEVIGKKD 95 (268)
T ss_pred CCCHHHCCCCCCEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHC
T ss_conf 95987668853054146875455209999999999999999999963898278511889999999999987551136021
Q ss_pred CCCCHHHHHHHHHHHHCCCCCCCHHHH-HHHHCCCCCCHHHHHHHHHHHHHHHHHHCCC-CCCCC-CCCCCCCCCCCCHH
Q ss_conf 753025899999985123232301245-4431035542146799999999999841586-42111-38999987543023
Q gi|254781088|r 81 SKNFFPFVFSLFVFLTTANLLGLHPYL-FSFTSQIVVTTSFSLLVVLSVVISGFYVNGL-GFLRL-FIPKDIPLLIKPLV 157 (250)
Q Consensus 81 ~~~~~p~i~TlF~fIl~~NllGLiP~~-~~~Ta~l~~t~~lal~~~~~~~~~g~~~~g~-~~~~~-~~~~g~p~~l~p~~ 157 (250)
T Consensus 96 g~k~~P~i~TlF~fIl~~Nl~GliP~~~~p~Ts~i~~t~~LAl~v~~~~~~~Gik~~G~~~y~k~~~~P~g~p~~l~pll 175 (268)
T PRK13416 96 GRKYVPLLFSLFFFVLVNNIWGIIPVAQFPSTSRIAGPYVLAAVVYVTWIYLGIKKNGFGKYFKLMTVPPGVPLYILPLL 175 (268)
T ss_pred CCEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCHHHHHHH
T ss_conf 54515999999999999998736310548864006788999999999999999999650888899808999841488889
Q ss_pred HHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 3356776-544133333577787776899999999999999987889999999999999999999999999999999999
Q gi|254781088|r 158 CFIEVSS-FLFRPVSLSLRLFANMLAGHLMLKVFAGFSTSMMSIGMLGIAFSFLPVLANVAVTGLEFFVAFMQAYIFMVL 236 (250)
Q Consensus 158 ~~iE~is-~~~rp~sLs~RLfgNi~aG~iil~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~v~~iQAyVF~~L 236 (250)
T Consensus 176 ~pIE~is~~l~RPiSL~lRLfaNm~AGhill~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~fEl~Va~iQAYVFtlL 253 (268)
T PRK13416 176 IPIEFISNFLVRPFTHAVRLFANMFAGHLLLLLFGSGAWYLLPQE--NFVFKGASLLVAVAMTMFELLIMALQAYVFTLL 253 (268)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999862489999999999864999999999999998757--899999999999999999999999999999999
Q ss_pred HHHHHHHHCCCCCC
Q ss_conf 99997334010349
Q gi|254781088|r 237 ACVYIGDVYRSDQH 250 (250)
Q Consensus 237 t~~Yi~~a~~~~~h 250 (250)
T Consensus 254 t~vYi~~Ai~h~e~ 267 (268)
T PRK13416 254 TAAYIGGAMLHADS 267 (268)
T ss_pred HHHHHHHHHHCCCC
T ss_conf 99999877603236