RPSBLAST alignment of GI: 254781088 and protein with PDBid: 1c17

>1c17_M ATP synthase subunit A; membrane protein, helix, complex; NMR {Escherichia coli} SCOP: f.18.1.1 Length = 177

 Score = 75.4 bits (185), Expect = 1e-14
 Identities = 47/183 (25%), Positives = 74/183 (40%), Gaps = 30/183 (16%)

Query: 79  NQSKNFFPFVFSLFVFLTTANLLGLHPYLF----------------SFTSQIVVTTSFSL 122
            +SK   P   ++FV++   NL+ L P                     ++ + VT S +L
Sbjct: 2   GKSKLIAPLALTIFVWVFLMNLMDLLPIDLLPYIAEHVLGLPALRVVPSADVNVTLSMAL 61

Query: 123 LVVLSVVISGFYVNGLG--FLRLFIPKDIPLLIKPLVCFIEVSSFLFRPVSLSLRLFANM 180
            V + ++     + G+G     L +         P+   +E  S L +PVSL LRLF NM
Sbjct: 62  GVFILILFYSIKMKGIGGFTKELTLQPFNHWAFIPVNLILEGVSLLSKPVSLGLRLFGNM 121

Query: 181 LAGHLMLKVFAGFSTSMMSIGMLGIAFSFLPVLANVAVTGLEFFVAFMQAYIFMVLACVY 240
            AG L+  + AG                +   + NV        +  +QA+IFMVL  VY
Sbjct: 122 YAGELIFILIAGL------------LPWWSQWILNVPWAIFHILIITLQAFIFMVLTIVY 169

Query: 241 IGD 243
           +  
Sbjct: 170 LSM 172