HHsearch alignment for GI: 254781091 and conserved domain: COG0001
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism].
Probab=99.54 E-value=7.3e-13 Score=97.64 Aligned_cols=321 Identities=19% Similarity=0.237 Sum_probs=180.5
Q ss_pred EECCCCCC-CC-----CCHHHHHHHHHHHHH---CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEECCHHHHH
Q ss_conf 01215788-89-----898999999999964---2885236589999999999999999997298977898866853876
Q gi|254781091|r 5 VYLDWNAT-AP-----LLEVVRQSFVKSLDF---YGNPSSVHKEGQKTRLYIEESRRIIADFCGAKPDHVVFTSSATEAA 75 (383)
Q Consensus 5 iYlD~aat-tp-----~~~~v~~a~~~~~~~---~~n~~s~h~~~~~~~~~~e~aR~~ia~~~g~~~~ei~ft~~~T~a~ 75 (383)
T Consensus 54 ~YIDy~~~~Gp~ilGH~~p~V~~Av~~~l~~G~~fg~Pt---------e~Ei~~A-ell~~~~p~~-e~vrfvnSGTEAt 122 (432)
T COG0001 54 EYIDYVLGWGPLILGHAHPAVVEAVQEQLERGLSFGAPT---------ELEVELA-ELLIERVPSI-EKVRFVNSGTEAT 122 (432)
T ss_pred EEEEHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC---------HHHHHHH-HHHHHHCCCC-CEEEEECCHHHHH
T ss_conf 754013057650008898799999999997267778997---------7899999-9999865865-0899860640899
Q ss_pred HHHHHH-HHHHCCCCCCCCEEEECC-CCCCCCCCCCCCC-------------------CCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 445565-442102245664587333-2122111222222-------------------2222222222222111023455
Q gi|254781091|r 76 NWVLTP-HFYQGSHKISIDSLYISA-IEHPAVYAGGHFP-------------------SHKIHKIPVLSKGIVDIQALTD 134 (383)
Q Consensus 76 ~~~i~~-~~~~~~~~~~~~~ii~s~-~eH~s~~~~~~~~-------------------~~~v~~v~~~~~g~i~~~~l~~ 134 (383)
T Consensus 123 msAiRlARa~Tg-----R~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~~a~~ti~~~yN-----D~~al~~ 192 (432)
T COG0001 123 MSAIRLARAYTG-----RDKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVLPYN-----DLEALEE 192 (432)
T ss_pred HHHHHHHHHHHC-----CCEEEEECCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCHHHHCCEEEECCC-----CHHHHHH
T ss_conf 999999987647-----975999728888871187842676755578999999973453447884579-----9999999
Q ss_pred HHHHHHCCCCCCEEEEECCCCCCCCCCC----HHHHHHHHCCCCCCCCCCCCCCCCCCC----CCCCCCCCEEEEECCCC
Q ss_conf 3244311356532654034344433321----123565203446533444323365544----44433431068730543
Q gi|254781091|r 135 FLEQRNSTCGIPMIAVMFVNNETGVIQP----IKEIAQIVKEYQGILVVDAVQAAGRIP----LSIEEIKADFLIISSHK 206 (383)
Q Consensus 135 ~i~~~t~~~~~~LVs~~~~~n~tG~i~p----i~~I~~~~~~~g~~~~vD~aqa~g~~~----id~~~~~~D~~~~S~hK 206 (383)
T Consensus 193 ~~~~~g~~IA--aVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViTGFR~~~gGaq~~~gi~PDlttlG--K 268 (432)
T COG0001 193 AFEEYGDDIA--AVIVEPVAGNMGVVPPEPGFLEGLRELTEEHGALLIFDEVITGFRVALGGAQGYYGVEPDLTTLG--K 268 (432)
T ss_pred HHHHCCCCEE--EEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCHHHCCCCCCCCCCCCCCCCCHHHHH--H
T ss_conf 9987689679--99954246788989898789999999999719489986221204547764201008696333222--4
Q ss_pred -CCCCCCCHHHHCCCCCCCC-CCCCCCCCCCCCCCCCCCCC--CCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf -3223432011014574201-22122477421222222211--2221001221100100245653210123333444443
Q gi|254781091|r 207 -LGAPVGAGALVFREDILLP-SPLLRGGDQEKGQRAGTENY--AVIGGFAVAAQQMVKDIQKRSSRVFAIRDYLEQELKK 282 (383)
Q Consensus 207 -~~GP~G~G~L~~r~~~~~~-~p~~~Gg~~e~~~~~GT~~~--~~i~~~~~al~~~~~~~~~~~~~~~~L~~~l~~~l~~ 282 (383)
T Consensus 269 iIGGGlP~ga~gGr~eiM~~~~p~--g----~vyqaGT~sgnplamaAG~atl~~l~~~-~~~y~~l~~~~~~L~~gl~~ 341 (432)
T COG0001 269 IIGGGLPIGAFGGRAEIMEQLAPL--G----PVYQAGTLSGNPLAMAAGLATLEELMTE-EGVYERLDALGERLAEGLRA 341 (432)
T ss_pred HHCCCCCEEEECCHHHHHHHHCCC--C----CCCCCCCCCCCHHHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHHHHH
T ss_conf 404775201125699999632778--8----7645677788689999999999998736-51899999999999999999
Q ss_pred HHHCCCCCCCCCCCCCCEEEEEECCC---CHHHH-----------HHHHHHCCCEEEECHHHCCCCCCCCHHHHHCCCCC
Q ss_conf 21000122322110365228985799---99999-----------99987589699871133886433101467628887
Q gi|254781091|r 283 LIPNIIIYGKDAERISNTCCFSIPFL---KAEVL-----------QIALDLEGIAVSAGSACSSGKIKKNHVLAAMGFDT 348 (383)
Q Consensus 283 ~~~~~~i~~~~~~~~~~i~~~~~~~~---~~~~v-----------~~~l~~~gI~v~~G~~C~~~~~~~~~vl~~~g~~~ 348 (383)
T Consensus 342 ~~~~~g~~-~~v~~~gsm~~i~F~~~~~~n~~da~~sd~~~~~~~~~~~l~~GV~l~----------------------- 397 (432)
T COG0001 342 AAERHGIP-LTVNRVGSMFGIFFTEEGVRNYADAKRSDVERFAKFFHHLLNRGVYLA----------------------- 397 (432)
T ss_pred HHHHHCCC-EEEEEECCEEEEEECCCCCCCHHHHHHHCHHHHHHHHHHHHHCCCCCC-----------------------
T ss_conf 99983998-588620425899955899888999986356999999999996882347-----------------------
Q ss_pred CCCEE-EEEECCCCCHHHHHHHHHHHHHHHHHHCC
Q ss_conf 47659-99907888999999999999999986237
Q gi|254781091|r 349 SQGAV-RVSCGDSTTQEDIDIFLNALQKIIRTSTV 382 (383)
Q Consensus 349 ~~g~v-RiS~~~~nT~~dId~l~~~L~~iv~~~~~ 382 (383)
T Consensus 398 -ps~~ea~flS~ahte~di~~~~~a~~~~~~~~~~ 431 (432)
T COG0001 398 -PSQFEAGFLSTAHTEEDIDRTLEAADEAFKELAG 431 (432)
T ss_pred -CCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHC
T ss_conf -7555545520046899999999999999998633