HHsearch alignment for GI: 254781091 and conserved domain: COG0076
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism].
Probab=99.95 E-value=5.7e-27 Score=183.11 Aligned_cols=305 Identities=21% Similarity=0.263 Sum_probs=209.8
Q ss_pred CCCCCCCHHHHHHHHHHHHH-CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCH-HHEEEECCHHHHHHHHHHHHHHHCC
Q ss_conf 78889898999999999964-288523658999999999999999999729897-7898866853876445565442102
Q gi|254781091|r 10 NATAPLLEVVRQSFVKSLDF-YGNPSSVHKEGQKTRLYIEESRRIIADFCGAKP-DHVVFTSSATEAANWVLTPHFYQGS 87 (383)
Q Consensus 10 aattp~~~~v~~a~~~~~~~-~~n~~s~h~~~~~~~~~~e~aR~~ia~~~g~~~-~ei~ft~~~T~a~~~~i~~~~~~~~ 87 (383)
T Consensus 69 ~~~~~~~~~a~~~~~~~~~~nl~d~~-~~p~---a~~~E~~~v~~l~~l~~~~~~~~G~~t~GgTean~lal~aar~~~~ 144 (460)
T COG0076 69 FCPTRVPPVAAELLVSALNKNLGDPD-ESPA---AAELEERVVNMLSDLLGAPEEASGTFTSGGTEANLLALLAARERWR 144 (460)
T ss_pred CCCCCCHHHHHHHHHHHHHCCCCCCC-CCCC---HHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHH
T ss_conf 57888679999999998734799812-3831---5888999999999995799766067961707999999999999987
Q ss_pred C--C------CCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCC
Q ss_conf 2--4------5664587333212211122222222222222222-22111023455324431135653265403434443
Q gi|254781091|r 88 H--K------ISIDSLYISAIEHPAVYAGGHFPSHKIHKIPVLS-KGIVDIQALTDFLEQRNSTCGIPMIAVMFVNNETG 158 (383)
Q Consensus 88 ~--~------~~~~~ii~s~~eH~s~~~~~~~~~~~v~~v~~~~-~g~i~~~~l~~~i~~~t~~~~~~LVs~~~~~n~tG 158 (383)
T Consensus 145 ~~~~~~~~~~~~~P~ii~s~~aH~s~~Kaa~~lG~~~~~v~~~~~~~~id~~~l~~~i~~~t~~g---~vV~~aGtT~~G 221 (460)
T COG0076 145 KRALAESGKPGGKPNIVCSETAHFSFEKAARYLGLGLRRVPTVPTDYRIDVDALEEAIDENTIGG---VVVGTAGTTDTG 221 (460)
T ss_pred HHHHHCCCCCCCCCEEEECCCCCEEHHHHHHHHCCCCEEEEEECCCEEECHHHHHHHHHHHCCCC---EEEEECCCCCCC
T ss_conf 66442023446887499457431209999998188523787524750568999999998746476---499972688887
Q ss_pred CCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCC-------CCCCCCCEEEEECCCCC-CCCCCCHHHHCCCC-CC-----C
Q ss_conf 33211235652034465334443233655444-------44334310687305433-22343201101457-42-----0
Q gi|254781091|r 159 VIQPIKEIAQIVKEYQGILVVDAVQAAGRIPL-------SIEEIKADFLIISSHKL-GAPVGAGALVFRED-IL-----L 224 (383)
Q Consensus 159 ~i~pi~~I~~~~~~~g~~~~vD~aqa~g~~~i-------d~~~~~~D~~~~S~hK~-~GP~G~G~L~~r~~-~~-----~ 224 (383)
T Consensus 222 ~iDdi~~ia~ia~~~~i~lHVDAA~GG~~~pf~~~~~~~~f~l~~vdSIt~d~HK~g~aP~~~G~il~rd~e~l~~~~~~ 301 (460)
T COG0076 222 SIDDIEELADIAEEYGIWLHVDAAFGGFLLPFLEPDGRWDFGLEGVDSITVDGHKYGLAPIGCGVVLFRDEEALRRILIF 301 (460)
T ss_pred CCCCHHHHHHHHHHCCCCEEEECCCCCHHHHCCCCCCHHHCCCCCCEEEEECCCCCCCCCCCCEEEEEECHHHHHHHHHC
T ss_conf 77889999999997699789873440021102474225351788820899886427788887069999688984677612
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEE
Q ss_conf 1221224774212222222112221001221100-100245653210123333444443210001223221103652289
Q gi|254781091|r 225 PSPLLRGGDQEKGQRAGTENYAVIGGFAVAAQQM-VKDIQKRSSRVFAIRDYLEQELKKLIPNIIIYGKDAERISNTCCF 303 (383)
Q Consensus 225 ~~p~~~Gg~~e~~~~~GT~~~~~i~~~~~al~~~-~~~~~~~~~~~~~L~~~l~~~l~~~~~~~~i~~~~~~~~~~i~~~ 303 (383)
T Consensus 302 ~~~yl~~~~~~~~ti~~sr~~~~~~~~~~~l~~lG~eGy~~l~~~~~~~a~~la~~l~~~-~~~e~~~~p---~l~~V~f 377 (460)
T COG0076 302 ADYYLPGGGIPNFTILGSRPGRQALALYANLRRLGREGYRKLLDRTLELARYLAEELEKL-GDFELVNEP---ELPIVAF 377 (460)
T ss_pred CCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCCEEECCC---CCEEEEE
T ss_conf 366778778666368850541899999999999678889999999999999999998647-882763388---6507999
Q ss_pred EECCC-C-HHHHHHHHHHCCCEEE
Q ss_conf 85799-9-9999999875896998
Q gi|254781091|r 304 SIPFL-K-AEVLQIALDLEGIAVS 325 (383)
Q Consensus 304 ~~~~~-~-~~~v~~~l~~~gI~v~ 325 (383)
T Consensus 378 r~~~~~~~~~~~~~~~~~~gw~v~ 401 (460)
T COG0076 378 RLKDDEDTLADLSERLDRRGWQVP 401 (460)
T ss_pred ECCCCCCCHHHHHHHHHHCCCEEE
T ss_conf 657643202314789986297552