HHsearch alignment for GI: 254781091 and conserved domain: COG0112

>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism].
Probab=99.84  E-value=5.8e-20  Score=140.65  Aligned_cols=330  Identities=17%  Similarity=0.193  Sum_probs=209.5

Q ss_pred             CCCCHHHHHHHHHHHH-HC--CCCCHHHHHHHHHHHHHH-HHHHHHHHHCCCCHHHEEEECCHHHHHHHHHHHHHHHCCC
Q ss_conf             8989899999999996-42--885236589999999999-9999999972989778988668538764455654421022
Q gi|254781091|r   13 APLLEVVRQSFVKSLD-FY--GNPSSVHKEGQKTRLYIE-ESRRIIADFCGAKPDHVVFTSSATEAANWVLTPHFYQGSH   88 (383)
Q Consensus        13 tp~~~~v~~a~~~~~~-~~--~n~~s~h~~~~~~~~~~e-~aR~~ia~~~g~~~~ei~ft~~~T~a~~~~i~~~~~~~~~   88 (383)
T Consensus        36 N~~S~aV~~A~gS~ltnKYAEGyPgkRyYgGce~VD~vE~laierak~LFga~~anVQPh-SGs~AN~av~~All~p---  111 (413)
T COG0112          36 NFTSPAVMEAQGSDLTNKYAEGYPGKRYYGGCEYVDEVEELAIERAKKLFGAEYANVQPH-SGSQANQAVYLALLQP---  111 (413)
T ss_pred             CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCC-CCHHHHHHHHHHHCCC---
T ss_conf             547899999974577530115899763567872179999999999999848875045888-7568999999997389---


Q ss_pred             CCCCCEEEECCCCCCCC---CCCCCCCC--CCCCCCCCC-CCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCC
Q ss_conf             45664587333212211---12222222--222222222-2221110234553244311356532654034344433321
Q gi|254781091|r   89 KISIDSLYISAIEHPAV---YAGGHFPS--HKIHKIPVL-SKGIVDIQALTDFLEQRNSTCGIPMIAVMFVNNETGVIQP  162 (383)
Q Consensus        89 ~~~~~~ii~s~~eH~s~---~~~~~~~~--~~v~~v~~~-~~g~i~~~~l~~~i~~~t~~~~~~LVs~~~~~n~tG~i~p  162 (383)
T Consensus       112 ---GD~imgm~l~~GGHltHg~~v~~sG~~~~~v~Y~vd~et~~IDyD~~~k~a~e~k----PKlii~-G~Sa-Y~r~id  182 (413)
T COG0112         112 ---GDTIMGLDLSHGGHLTHGSPVNFSGKLFNVVSYGVDPETGLIDYDEVEKLAKEVK----PKLIIA-GGSA-YSRPID  182 (413)
T ss_pred             ---CCEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHC----CCEEEE-CCCC-CCCCCC
T ss_conf             ---8857505678787655799877664057767624063347517999999999849----978997-7603-554467


Q ss_pred             HHHHHHHHCCCCCCCCCCCCCCCCC-----CCCCCCCCCCEEEEECCCC-CCCCCCCHHHHCCC-CCCCC-CCCCCCCCC
Q ss_conf             1235652034465334443233655-----4444433431068730543-32234320110145-74201-221224774
Q gi|254781091|r  163 IKEIAQIVKEYQGILVVDAVQAAGR-----IPLSIEEIKADFLIISSHK-LGAPVGAGALVFRE-DILLP-SPLLRGGDQ  234 (383)
Q Consensus       163 i~~I~~~~~~~g~~~~vD~aqa~g~-----~~id~~~~~~D~~~~S~hK-~~GP~G~G~L~~r~-~~~~~-~p~~~Gg~~  234 (383)
T Consensus       183 ~~~~reIad~VGA~L~~DmAHiaGLVA~G~~p~P~~~--AdvVTtTTHKTlrGPrG-G~Il~~~eel~kkin~aVFPg~-  258 (413)
T COG0112         183 FKRFREIADEVGAYLMVDMAHVAGLIAGGVHPNPLPH--ADVVTTTTHKTLRGPRG-GIILTNDEELAKKINSAVFPGL-  258 (413)
T ss_pred             HHHHHHHHHHHCCEEEEHHHHHHHHHHCCCCCCCCCC--CCEEECCCCCCCCCCCC-EEEEECCHHHHHHHHHHCCCCC-
T ss_conf             8999999987193677217788888745667999875--52675775347789984-1798362999987640007766-


Q ss_pred             CCCCCCCCCCCCCCCCHHHHHHCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEE--CCCCHH
Q ss_conf             21222222211222100122110010-024565321012333344444321000122322110365228985--799999
Q gi|254781091|r  235 EKGQRAGTENYAVIGGFAVAAQQMVK-DIQKRSSRVFAIRDYLEQELKKLIPNIIIYGKDAERISNTCCFSI--PFLKAE  311 (383)
Q Consensus       235 e~~~~~GT~~~~~i~~~~~al~~~~~-~~~~~~~~~~~L~~~l~~~l~~~~~~~~i~~~~~~~~~~i~~~~~--~~~~~~  311 (383)
T Consensus       259 -----qggpl~HviAakaVa~~Eal~p~fk~Ya~qVv~NAkaLAe~l~~~--G~~vvsGgTdn--Hl~lVDl~~~~~~Gk  329 (413)
T COG0112         259 -----QGGPLMHVIAAKAVAFKEALEPEFKEYAKQVVKNAKALAEALKER--GFKVVSGGTDN--HLVLVDLRSKGLTGK  329 (413)
T ss_pred             -----CCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHC--CCEEECCCCCC--EEEEEECCCCCCCHH
T ss_conf             -----788278889999999999728138999999999999999999976--98671588644--489997246798778


Q ss_pred             HHHHHHHHCCCEEEECHHHCCCCCCCCHHHHHCCCCCCCCEEEEEECCCCC----HHHHHHHHHHHHHHHHH
Q ss_conf             999998758969987113388643310146762888747659999078889----99999999999999986
Q gi|254781091|r  312 VLQIALDLEGIAVSAGSACSSGKIKKNHVLAAMGFDTSQGAVRVSCGDSTT----QEDIDIFLNALQKIIRT  379 (383)
Q Consensus       312 ~v~~~l~~~gI~v~~G~~C~~~~~~~~~vl~~~g~~~~~g~vRiS~~~~nT----~~dId~l~~~L~~iv~~  379 (383)
T Consensus       330 ~ae~~L~~~~It~N-------KN~iP~D~---~~-p~~tSGIRiGtpa~TtrG~~e~e~~~Ia~~I~~vl~~  390 (413)
T COG0112         330 KAEAALERAGITVN-------KNAIPFDP---ES-PFVTSGIRIGTPAVTTRGFGEAEMEEIADLIADVLDG  390 (413)
T ss_pred             HHHHHHHHCCEEEC-------CCCCCCCC---CC-CCCCCCCEECCHHHHHCCCCHHHHHHHHHHHHHHHHC
T ss_conf             99999997097652-------68899999---88-8787663406688863579889999999999999955