HHsearch alignment for GI: 254781091 and conserved domain: COG0520
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones].
Probab=100.00 E-value=0 Score=553.55 Aligned_cols=357 Identities=30% Similarity=0.457 Sum_probs=322.8
Q ss_pred CEECCCCCCCCCCHHHHHHHHHHHH-HCCCCC-HHHHHHHHHHHHHHHHHHHHHHHCCCCH-HHEEEECCHHHHHHHHHH
Q ss_conf 0012157888989899999999996-428852-3658999999999999999999729897-789886685387644556
Q gi|254781091|r 4 RVYLDWNATAPLLEVVRQSFVKSLD-FYGNPS-SVHKEGQKTRLYIEESRRIIADFCGAKP-DHVVFTSSATEAANWVLT 80 (383)
Q Consensus 4 ~iYlD~aattp~~~~v~~a~~~~~~-~~~n~~-s~h~~~~~~~~~~e~aR~~ia~~~g~~~-~ei~ft~~~T~a~~~~i~ 80 (383)
T Consensus 23 ~vylD~aa~~~~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~~a~~~~eIvft~~tT~aln~va~ 102 (405)
T COG0520 23 LVYLDNAATSQKPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFLNADSSDEIVFTRGTTEALNLVAR 102 (405)
T ss_pred CEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHH
T ss_conf 47636765666788999999999997402457554412799999999999999998199987729995983799999999
Q ss_pred HHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCC----CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCC
Q ss_conf 544210224566458733321221112222222----2222222222221110234553244311356532654034344
Q gi|254781091|r 81 PHFYQGSHKISIDSLYISAIEHPAVYAGGHFPS----HKIHKIPVLSKGIVDIQALTDFLEQRNSTCGIPMIAVMFVNNE 156 (383)
Q Consensus 81 ~~~~~~~~~~~~~~ii~s~~eH~s~~~~~~~~~----~~v~~v~~~~~g~i~~~~l~~~i~~~t~~~~~~LVs~~~~~n~ 156 (383)
T Consensus 103 ~l~~~---~~~gdeIv~s~~EH~sn~~pw~~~~~~~Ga~v~~i~~~~~g~~~~d~~~~~i~~~Tk-----lvais~vSn~ 174 (405)
T COG0520 103 GLGRS---LKPGDEIVVSDLEHHSNIVPWQELAKRTGAKVRVIPLDDDGLLDLDALEKLITPKTK-----LVALSHVSNV 174 (405)
T ss_pred HHHHH---HCCCCEEEEECCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHCCCCCE-----EEEEECCCCC
T ss_conf 70241---068998998046552008999999987596899984189997288999864699944-----9999664167
Q ss_pred CCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCC-CCCCCCCHHHHCCCCCCCCC-CCCCCCCC
Q ss_conf 43332112356520344653344432336554444433431068730543-32234320110145742012-21224774
Q gi|254781091|r 157 TGVIQPIKEIAQIVKEYQGILVVDAVQAAGRIPLSIEEIKADFLIISSHK-LGAPVGAGALVFREDILLPS-PLLRGGDQ 234 (383)
Q Consensus 157 tG~i~pi~~I~~~~~~~g~~~~vD~aqa~g~~~id~~~~~~D~~~~S~hK-~~GP~G~G~L~~r~~~~~~~-p~~~Gg~~ 234 (383)
T Consensus 175 tG~~~pv~~I~~la~~~ga~v~VDaaq~~~h~~idv~~l~~Df~afsgHKwl~gP~GiGvLy~r~~~l~~l~P~~~gg~~ 254 (405)
T COG0520 175 TGTVNPVKEIAELAHEHGALVLVDAAQAAGHLPIDVQELGCDFLAFSGHKWLLGPTGIGVLYVRKELLEELEPFLGGGGM 254 (405)
T ss_pred CCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHCCCCEEEECCCCCCCCCCCEEEEEECHHHHHHCCCCCCCCCC
T ss_conf 55404099999999984998999771334756688556189899976743257998529999866558437897778872
Q ss_pred ---------------CCCCCCCCCCCCCCCCHHHHHHCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf ---------------21222222211222100122110010-02456532101233334444432100012232211036
Q gi|254781091|r 235 ---------------EKGQRAGTENYAVIGGFAVAAQQMVK-DIQKRSSRVFAIRDYLEQELKKLIPNIIIYGKDAERIS 298 (383)
Q Consensus 235 ---------------e~~~~~GT~~~~~i~~~~~al~~~~~-~~~~~~~~~~~L~~~l~~~l~~~~~~~~i~~~~~~~~~ 298 (383)
T Consensus 255 ~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~~~~ig~~~i~~~e~~L~~~~~~~L~~-~~~v~i~g~~~~~r~ 333 (405)
T COG0520 255 IEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDYLLEIGMEAIEAHERELTEYLLEGLSE-LPGVEIYGPPDADRG 333 (405)
T ss_pred EEECCCCCCCEECCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCCEEEECCCCCCCC
T ss_conf 4401445553015641531557843788986999999999857999999999999999999854-898499646634677
Q ss_pred CEEEEEECCCCHHHHHHHHHHCCCEEEECHHHCCCCCCCCHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHH
Q ss_conf 52289857999999999987589699871133886433101467628887476599990788899999999999999998
Q gi|254781091|r 299 NTCCFSIPFLKAEVLQIALDLEGIAVSAGSACSSGKIKKNHVLAAMGFDTSQGAVRVSCGDSTTQEDIDIFLNALQKIIR 378 (383)
Q Consensus 299 ~i~~~~~~~~~~~~v~~~l~~~gI~v~~G~~C~~~~~~~~~vl~~~g~~~~~g~vRiS~~~~nT~~dId~l~~~L~~iv~ 378 (383)
T Consensus 334 ~~vsF~v~~~~~~dv~~~L~~~gI~vr~g~~ca~p~~------~~~~~~---~~iR~S~~~YNt~edid~l~~aL~~~~~ 404 (405)
T COG0520 334 GIVSFNVKGIHPHDVATLLDEKGIAVRAGHHCAQPLH------RLLGVD---ATIRASLHLYNTEEDVDRLLEALKKALA 404 (405)
T ss_pred CEEEEEECCCCHHHHHHHHHHCCEEEEECCCCCHHHH------HHCCCC---CCEEEEEECCCCHHHHHHHHHHHHHHHC
T ss_conf 4699997895989999999867869982564432678------753777---7579997425999999999999998741