HHsearch alignment for GI: 254781091 and conserved domain: COG1932
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism].
Probab=99.68 E-value=1e-14 Score=108.88 Aligned_cols=330 Identities=19% Similarity=0.187 Sum_probs=198.0
Q ss_pred CCCEECCCCCCCCCCHHHHHHHHHHHHHCCCCC-HHHHHH---HHHHHHHHHHHHHHHHHCCCCHH-HEEEEC-CHHHHH
Q ss_conf 870012157888989899999999996428852-365899---99999999999999997298977-898866-853876
Q gi|254781091|r 2 FKRVYLDWNATAPLLEVVRQSFVKSLDFYGNPS-SVHKEG---QKTRLYIEESRRIIADFCGAKPD-HVVFTS-SATEAA 75 (383)
Q Consensus 2 ~~~iYlD~aattp~~~~v~~a~~~~~~~~~n~~-s~h~~~---~~~~~~~e~aR~~ia~~~g~~~~-ei~ft~-~~T~a~ 75 (383)
T Consensus 3 ~~~~~nFsaGPa~lp~~vL~~a~~e~~~~~g~g~svme~SHRsk~~~~v~~~a~~~lreLl~iPd~Y~VlflqGGat~qf 82 (365)
T COG1932 3 MPRVYNFSAGPAALPPEVLQQAQKELLDWNGLGMSVMEISHRSKEFKNVLEEAEKDLRELLNIPDDYKVLFLQGGATGQF 82 (365)
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHH
T ss_conf 87788878885248989999999988634167863012213338889999999998999957998746999748537899
Q ss_pred HHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCC----CCC----CCCC--CC--CCCC-CCHHHHHHHHHHHCC
Q ss_conf 445565442102245664587333212211122222222----222----2222--22--2211-102345532443113
Q gi|254781091|r 76 NWVLTPHFYQGSHKISIDSLYISAIEHPAVYAGGHFPSH----KIH----KIPV--LS--KGIV-DIQALTDFLEQRNST 142 (383)
Q Consensus 76 ~~~i~~~~~~~~~~~~~~~ii~s~~eH~s~~~~~~~~~~----~v~----~v~~--~~--~g~i-~~~~l~~~i~~~t~~ 142 (383)
T Consensus 83 ~~~p~nLl~~~----~~~yv~~g---------~Ws~~a~~eA~~~~~~~~~~~~~~~~~~~~~iP~~~~~~--~~~~--- 144 (365)
T COG1932 83 AMAPMNLLGKR----GTDYVDTG---------AWSEFAIKEAKKVGKQPKLIDARIEEAGYGSIPDLSKWD--FSDN--- 144 (365)
T ss_pred HHHHHHHHCCC----CCEEEEEE---------EHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCHHHCC--CCCC---
T ss_conf 98888642135----75057662---------145768999998645653123200026766799822146--6777---
Q ss_pred CCCCEEEEECCCCC--CCCCCC-HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHCC
Q ss_conf 56532654034344--433321-123565203446533444323365544444334310687305433223432011014
Q gi|254781091|r 143 CGIPMIAVMFVNNE--TGVIQP-IKEIAQIVKEYQGILVVDAVQAAGRIPLSIEEIKADFLIISSHKLGAPVGAGALVFR 219 (383)
Q Consensus 143 ~~~~LVs~~~~~n~--tG~i~p-i~~I~~~~~~~g~~~~vD~aqa~g~~~id~~~~~~D~~~~S~hK~~GP~G~G~L~~r 219 (383)
T Consensus 145 --~ayv~~~~--NeTi~Gv~v~~~p~~~~---~--~~~v~D~SS~ilsr~iDvsk~--dviyagaQKnlGpaGltvvIvr 213 (365)
T COG1932 145 --DAYVHFCW--NETISGVEVPELPDIGS---D--GLLVADASSAILSRPIDVSKY--DVIYAGAQKNLGPAGLTVVIVR 213 (365)
T ss_pred --CCEEEEEC--CCCCCCEECCCCCCCCC---C--CEEEEECCCHHHCCCCCHHHC--CEEEEEHHHCCCCCCEEEEEEC
T ss_conf --55799934--88612157168898887---7--608996562775577775671--3588762112576553999986
Q ss_pred CCCCCCC-----CCCCCC--CCCCCCCCCCCCCCCCCCHHHHHHCCCC--HHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 5742012-----212247--7421222222211222100122110010--024565321012333344444321000122
Q gi|254781091|r 220 EDILLPS-----PLLRGG--DQEKGQRAGTENYAVIGGFAVAAQQMVK--DIQKRSSRVFAIRDYLEQELKKLIPNIIIY 290 (383)
Q Consensus 220 ~~~~~~~-----p~~~Gg--~~e~~~~~GT~~~~~i~~~~~al~~~~~--~~~~~~~~~~~L~~~l~~~l~~~~~~~~i~ 290 (383)
T Consensus 214 ~~~l~r~~~~~~P~if~y~~~~~~~s~yNTPptfa~y~~~lv~~Wlk~~GGl~~~~~rn~~ka~~LY~~id~s-~fy~~~ 292 (365)
T COG1932 214 PDLLERAESYTLPSIFDYLTHADNGSMYNTPPTFAWYLLGLVFKWLKSQGGLEALEARNQAKAQLLYDWIDKS-DFYRNL 292 (365)
T ss_pred HHHHHCCCCCCCCHHHHCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC-CCCCCC
T ss_conf 8997011356896176431211048842784899999999999999974999999998899899999998727-753344
Q ss_pred CCCCCCCCCEEEEEECCCCH-HHHHHHHHHCCCEEEECHHHCCCCCCCCHHHHHCCCCCCCCEEEEEECCCCCHHHHHHH
Q ss_conf 32211036522898579999-99999987589699871133886433101467628887476599990788899999999
Q gi|254781091|r 291 GKDAERISNTCCFSIPFLKA-EVLQIALDLEGIAVSAGSACSSGKIKKNHVLAAMGFDTSQGAVRVSCGDSTTQEDIDIF 369 (383)
Q Consensus 291 ~~~~~~~~~i~~~~~~~~~~-~~v~~~l~~~gI~v~~G~~C~~~~~~~~~vl~~~g~~~~~g~vRiS~~~~nT~~dId~l 369 (383)
T Consensus 293 v~~~~RS~mnV~f~~~~~~ld~~fv~eae~~gl~~lk------------------Gh-r~vgGmRasiynA~~~e~veaL 353 (365)
T COG1932 293 VAKANRSRMNVTFTLVDAELDKGFVAEAEAAGLIYLK------------------GH-RSVGGLRASIYNAVPLEDVEAL 353 (365)
T ss_pred CCHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCCEEC------------------CC-CCCCCEEEEEECCCCHHHHHHH
T ss_conf 5521215326898727377779999999973774102------------------66-4778616654357788999999
Q ss_pred HHHHHHHHHHH
Q ss_conf 99999999862
Q gi|254781091|r 370 LNALQKIIRTS 380 (383)
Q Consensus 370 ~~~L~~iv~~~ 380 (383)
T Consensus 354 ~~fm~~f~~~~ 364 (365)
T COG1932 354 TDFMDWFEETY 364 (365)
T ss_pred HHHHHHHHHHH
T ss_conf 99999999860