HHsearch alignment for GI: 254781091 and conserved domain: KOG1412
>KOG1412 consensus.
Probab=98.01 E-value=7.2e-05 Score=49.20 Aligned_cols=263 Identities=18% Similarity=0.170 Sum_probs=146.1
Q ss_pred CCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCC-C---CCCCCCCCCCCCCHHHHHHHHHHHCCCC
Q ss_conf 68538764455654421022456645873332122111222222222-2---2222222221110234553244311356
Q gi|254781091|r 69 SSATEAANWVLTPHFYQGSHKISIDSLYISAIEHPAVYAGGHFPSHK-I---HKIPVLSKGIVDIQALTDFLEQRNSTCG 144 (383)
Q Consensus 69 ~~~T~a~~~~i~~~~~~~~~~~~~~~ii~s~~eH~s~~~~~~~~~~~-v---~~v~~~~~g~i~~~~l~~~i~~~t~~~~ 144 (383)
T Consensus 106 lsGTGAl~~~A~Fl~~----~~~~~~VY~SnPTW~nH~~if~~aGf~tv~~Y~yWd-~~~k~~d~e~~Lsdl~~APe~-- 178 (410)
T KOG1412 106 LSGTGALRIAADFLAT----FYNKNTVYVSNPTWENHHAIFEKAGFTTVATYPYWD-AENKCVDLEGFLSDLESAPEG-- 178 (410)
T ss_pred CCCCCHHHHHHHHHHH----HCCCCEEEECCCCHHHHHHHHHHCCCCEEEEEEEEC-CCCCEECHHHHHHHHHHCCCC--
T ss_conf 1565324566788887----524652674388606778899873884455666315-777121399999898638987--
Q ss_pred CCEEEEECC--CCCCCCC---CCHHHHHHHHCCCCCCCCCCCC-CCCCCCCCCCCCCCC--------E-EEEECCCC---
Q ss_conf 532654034--3444333---2112356520344653344432-336554444433431--------0-68730543---
Q gi|254781091|r 145 IPMIAVMFV--NNETGVI---QPIKEIAQIVKEYQGILVVDAV-QAAGRIPLSIEEIKA--------D-FLIISSHK--- 206 (383)
Q Consensus 145 ~~LVs~~~~--~n~tG~i---~pi~~I~~~~~~~g~~~~vD~a-qa~g~~~id~~~~~~--------D-~~~~S~hK--- 206 (383)
T Consensus 179 -s-i~iLhaCAhNPTGmDPT~EQW~qia~vik~k~lf~fFDiAYQGfASGD~~~DawAiR~fV~~g~e~fv~QSFaKNfG 256 (410)
T KOG1412 179 -S-IIILHACAHNPTGMDPTREQWKQIADVIKSKNLFPFFDIAYQGFASGDLDADAWAIRYFVEQGFELFVCQSFAKNFG 256 (410)
T ss_pred -C-EEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEHHHCCCCCCCCCCCHHHHHHHHHCCCEEEEEHHHHHHCC
T ss_conf -3-78620013698789978899999999997447603542021012469954108999999961873887766564316
Q ss_pred CCCCCCCHHHH--CCCCCC---------------CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHH
Q ss_conf 32234320110--145742---------------0122122477421222222211222100122110010024565321
Q gi|254781091|r 207 LGAPVGAGALV--FREDIL---------------LPSPLLRGGDQEKGQRAGTENYAVIGGFAVAAQQMVKDIQKRSSRV 269 (383)
Q Consensus 207 ~~GP~G~G~L~--~r~~~~---------------~~~p~~~Gg~~e~~~~~GT~~~~~i~~~~~al~~~~~~~~~~~~~~ 269 (383)
T Consensus 257 lYneR-vGnltvv~~n~a~i~~v~SQl~lviR~~~SNPPAyGA----------rIV~kvL~tP~lre~W~~sik~MssRI 325 (410)
T KOG1412 257 LYNER-VGNLTVVVNNPAVIAGVKSQLTLVIRSNWSNPPAYGA----------RIVHKVLSTPELREQWIQSIKTMSSRI 325 (410)
T ss_pred CCCCC-CCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCHHH----------HHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_conf 64655-3636999447557777887779988612678851145----------899998468888999999999999999
Q ss_pred HHHHHHHHHHHHHHH-HCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCEEEECHHHCCCCCCCCHHHHHCCCCC
Q ss_conf 012333344444321-0001223221103652289857999999999987589699871133886433101467628887
Q gi|254781091|r 270 FAIRDYLEQELKKLI-PNIIIYGKDAERISNTCCFSIPFLKAEVLQIALDLEGIAVSAGSACSSGKIKKNHVLAAMGFDT 348 (383)
Q Consensus 270 ~~L~~~l~~~l~~~~-~~~~i~~~~~~~~~~i~~~~~~~~~~~~v~~~l~~~gI~v~~G~~C~~~~~~~~~vl~~~g~~~ 348 (383)
T Consensus 326 ~~MR~aLrd~L~aL~TPGt---WDHI~~QiGM--FSyTGLtp~qV~~li~~h~vyLl----------------------- 377 (410)
T KOG1412 326 KKMRTALRDHLVALKTPGT---WDHITQQIGM--FSYTGLTPAQVDHLIENHKVYLL----------------------- 377 (410)
T ss_pred HHHHHHHHHHHHHCCCCCC---HHHHHHHCCC--EEECCCCHHHHHHHHHHCEEEEE-----------------------
T ss_conf 9999999999986189985---7788765051--43148998999999873638994-----------------------
Q ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCC
Q ss_conf 4765999907888999999999999999986237
Q gi|254781091|r 349 SQGAVRVSCGDSTTQEDIDIFLNALQKIIRTSTV 382 (383)
Q Consensus 349 ~~g~vRiS~~~~nT~~dId~l~~~L~~iv~~~~~ 382 (383)
T Consensus 378 ~~G--RInisGLN~-~NveyVAkAIde~Vr~~~~ 408 (410)
T KOG1412 378 SDG--RINISGLNM-KNVEYVAKAIDETVRAIKS 408 (410)
T ss_pred CCC--CEEEECCCC-CCHHHHHHHHHHHHHHHCC
T ss_conf 388--376614565-4589999999999975236