HHsearch alignment for GI: 254781091 and conserved domain: KOG2040

>KOG2040 consensus.
Probab=98.14  E-value=5.9e-05  Score=49.74  Aligned_cols=276  Identities=18%  Similarity=0.221  Sum_probs=143.1

Q ss_pred             HHHHHHHCCCCHHHEEEECCHHHHHH-HHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCC--CCCCCCCCCCCCCCC
Q ss_conf             99999972989778988668538764-455654421022456645873332122111222222--222222222222211
Q gi|254781091|r   51 RRIIADFCGAKPDHVVFTSSATEAAN-WVLTPHFYQGSHKISIDSLYISAIEHPAVYAGGHFP--SHKIHKIPVLSKGIV  127 (383)
Q Consensus        51 R~~ia~~~g~~~~ei~ft~~~T~a~~-~~i~~~~~~~~~~~~~~~ii~s~~eH~s~~~~~~~~--~~~v~~v~~~~~g~i  127 (383)
T Consensus       169 QTmi~dlTGL~~aNASLLDEgTAaaEAm~l~~~~~------krkk~vvd~~~hpqtlsV~~TRa~~~~i~---------v  233 (1001)
T KOG2040         169 QTMITDLTGLPMANASLLDEGTAAAEAMALCNRIN------KRKKFVVDSNCHPQTLSVVKTRAKGFGIK---------V  233 (1001)
T ss_pred             HHHHHHCCCCCCCCHHHHCCCHHHHHHHHHHHHHC------CCCEEEECCCCCCCHHHHHHCCCCCCCEE---------E
T ss_conf             77766502886554233213125899999987632------26428865877833324652036665336---------8


Q ss_pred             CCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCC-CCCCCCCCCCCEEEEECCCC
Q ss_conf             10234553244311356532654034344433321123565203446533444323365-54444433431068730543
Q gi|254781091|r  128 DIQALTDFLEQRNSTCGIPMIAVMFVNNETGVIQPIKEIAQIVKEYQGILVVDAVQAAG-RIPLSIEEIKADFLIISSHK  206 (383)
Q Consensus       128 ~~~~l~~~i~~~t~~~~~~LVs~~~~~n~tG~i~pi~~I~~~~~~~g~~~~vD~aqa~g-~~~id~~~~~~D~~~~S~hK  206 (383)
T Consensus       234 ~~~~~~~~~~s~~~---v~gvlvQYP~-t~G~i~d~~el~~~a~~~~s~vv~a-tDLLaLtiLrpPgefGaDIavGSsQR  308 (1001)
T KOG2040         234 VVSDIKEADYSSKD---VSGVLVQYPD-TEGSVLDFDELVELAHANGSLVVMA-TDLLALTILRPPGEFGADIAVGSSQR  308 (1001)
T ss_pred             EECCHHHHHCCCCC---EEEEEEECCC-CCCCCCCHHHHHHHHHCCCCEEEEE-HHHHHHHCCCCHHHCCCEEEECCCCC
T ss_conf             84477872023355---2169997588-7776078899999763068558984-02568870278233284146414321


Q ss_pred             CC------CCCCCHHHHCCCCCCCCCCC-CCC------CCC---------C--CCCCCCCCCCCCC----CCHH--HHHH
Q ss_conf             32------23432011014574201221-224------774---------2--1222222211222----1001--2211
Q gi|254781091|r  207 LG------APVGAGALVFREDILLPSPL-LRG------GDQ---------E--KGQRAGTENYAVI----GGFA--VAAQ  256 (383)
Q Consensus       207 ~~------GP~G~G~L~~r~~~~~~~p~-~~G------g~~---------e--~~~~~GT~~~~~i----~~~~--~al~  256 (383)
T Consensus       309 FGVPlGYGGPH-AaFfAv~~~l~R~mPGRiiGvtkD~~gk~a~RLALQTREQHIrRDKATSNICTAQALLANmaAmyaiY  387 (1001)
T KOG2040         309 FGVPLGYGGPH-AAFFAVSESLVRMMPGRIIGVTKDALGKEAYRLALQTREQHIRRDKATSNICTAQALLANMAAMYAIY  387 (1001)
T ss_pred             CCCCCCCCCCH-HHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf             37655678840-88999999997438973575530566668899988889988763201001467999998778777543


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCEEEECHHHCCCCCC
Q ss_conf             00100245653210123333444443210001223221103652289857999999999987589699871133886433
Q gi|254781091|r  257 QMVKDIQKRSSRVFAIRDYLEQELKKLIPNIIIYGKDAERISNTCCFSIPFLKAEVLQIALDLEGIAVSAGSACSSGKIK  336 (383)
Q Consensus       257 ~~~~~~~~~~~~~~~L~~~l~~~l~~~~~~~~i~~~~~~~~~~i~~~~~~~~~~~~v~~~l~~~gI~v~~G~~C~~~~~~  336 (383)
T Consensus       388 HGp~gL~~IArrvh~~T~~l~~~l~~ag--hel~~k~---fFDTLkI~~~~-s~~~~l~rA~~~~iNlr~----------  451 (1001)
T KOG2040         388 HGPHGLKEIARRVHNLTLILAEGLKNAG--HELQHKP---FFDTLKIRCGC-SAEEVLDRAAKRQINLRL----------  451 (1001)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHCC--HHHCCCC---CCCEEEEEECC-CHHHHHHHHHHHCCCEEE----------
T ss_conf             0837899999998889999999876336--2330455---30037988368-599999999862366599----------


Q ss_pred             CCHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHH
Q ss_conf             10146762888747659999078889999999999999
Q gi|254781091|r  337 KNHVLAAMGFDTSQGAVRVSCGDSTTQEDIDIFLNALQ  374 (383)
Q Consensus       337 ~~~vl~~~g~~~~~g~vRiS~~~~nT~~dId~l~~~L~  374 (383)
T Consensus       452 -----------~ed~tigvslDETv~~~DvddLl~vf~  478 (1001)
T KOG2040         452 -----------VEDGTIGVSLDETVTEKDVDDLLWVFN  478 (1001)
T ss_pred             -----------EECCCEEEEECCCCCHHHHHHHHHHHC
T ss_conf             -----------606843686044353877999999972