HHsearch alignment for GI: 254781091 and conserved domain: PRK00854
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed.
Probab=99.73 E-value=2.1e-15 Score=113.00 Aligned_cols=323 Identities=18% Similarity=0.190 Sum_probs=182.4
Q ss_pred CEECCCCCC-C-----CCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEECCHHHHHHH
Q ss_conf 001215788-8-----9898999999999964288523658999999999999999999729897789886685387644
Q gi|254781091|r 4 RVYLDWNAT-A-----PLLEVVRQSFVKSLDFYGNPSSVHKEGQKTRLYIEESRRIIADFCGAKPDHVVFTSSATEAANW 77 (383)
Q Consensus 4 ~iYlD~aat-t-----p~~~~v~~a~~~~~~~~~n~~s~h~~~~~~~~~~e~aR~~ia~~~g~~~~ei~ft~~~T~a~~~ 77 (383)
T Consensus 44 ~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~l~~~~~~~~-----~~~~~~l~~~l~~~~~~--~~v~f~~SGsEAve~ 116 (404)
T PRK00854 44 RRYLDCLSAYSAVNQGHCHPKILAAMVEQAGRLTLTSRAFR-----NDQLAPLYEELAALTGS--HKVLPMNSGAEAVET 116 (404)
T ss_pred CEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCC-----CHHHHHHHHHHHHCCCC--CEEEECCCHHHHHHH
T ss_conf 99988262999775427979999999999856786555426-----57999999999740376--848855877999999
Q ss_pred HHHHHH-H--HCCCCCCC-CEEEECCC-CCCCCCCCCCCCCC---C---------CCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 556544-2--10224566-45873332-12211122222222---2---------2222222222111023455324431
Q gi|254781091|r 78 VLTPHF-Y--QGSHKISI-DSLYISAI-EHPAVYAGGHFPSH---K---------IHKIPVLSKGIVDIQALTDFLEQRN 140 (383)
Q Consensus 78 ~i~~~~-~--~~~~~~~~-~~ii~s~~-eH~s~~~~~~~~~~---~---------v~~v~~~~~g~i~~~~l~~~i~~~t 140 (383)
T Consensus 117 AiklAr~~~~~~~g~~tgr~~ii~~~~~yHG~t~~~~s~s~~~~~~~~~~~~~~~~~~~p~-----~d~~~l~~~~~~~~ 191 (404)
T PRK00854 117 AIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDARGGFGPFAPGFRVVPF-----GDAAALEAAITPNT 191 (404)
T ss_pred HHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECC-----CCHHHHHHHHCCCE
T ss_conf 9999999876503787898559996456678601354346774335688899998155056-----66899998639874
Q ss_pred CCCCCCEEEEECCCCCCCCCCC----HHHHHHHHCCCCCCCCCCCCCC-CCCC----CCCCCCCCCEEEEECCCC-CCCC
Q ss_conf 1356532654034344433321----1235652034465334443233-6554----444433431068730543-3223
Q gi|254781091|r 141 STCGIPMIAVMFVNNETGVIQP----IKEIAQIVKEYQGILVVDAVQA-AGRI----PLSIEEIKADFLIISSHK-LGAP 210 (383)
Q Consensus 141 ~~~~~~LVs~~~~~n~tG~i~p----i~~I~~~~~~~g~~~~vD~aqa-~g~~----~id~~~~~~D~~~~S~hK-~~GP 210 (383)
T Consensus 192 aA-----viiEPiqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~TGfGRtG~~fa~e~~gv~PDii~~g--Kgl~gG 264 (404)
T PRK00854 192 VA-----FLIEPIQGEAGVIIPPAGYFRRVRELCTANNVTLILDEIQTGLGRTGKLLAEEHEGIEADVTLIG--KALSGG 264 (404)
T ss_pred EE-----EEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCEEEEC--CCCCCC
T ss_conf 89-----99917757789617998999999999997076445750001786355741455424897989756--444588
Q ss_pred -CCCHHHHCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf -432011014574201-221224774212222222112221001221100100245653210123333444443210001
Q gi|254781091|r 211 -VGAGALVFREDILLP-SPLLRGGDQEKGQRAGTENYAVIGGFAVAAQQMVKDIQKRSSRVFAIRDYLEQELKKLIPNII 288 (383)
Q Consensus 211 -~G~G~L~~r~~~~~~-~p~~~Gg~~e~~~~~GT~~~~~i~~~~~al~~~~~~~~~~~~~~~~L~~~l~~~l~~~~~~~~ 288 (383)
T Consensus 265 ~~Pl~av~~~~~i~~~~~~~~h~-----~T~~g--npla~aaa~a~l~~i~~--e~l~~~~~~~g~~l~~~L~~l~~--~ 333 (404)
T PRK00854 265 FYPVSAVLSNSEVLGVLRPGQHG-----STFGG--NPLACAVARAALRVLVE--EGMIENAAEQGAYFLEGLRAIRG--N 333 (404)
T ss_pred CCCCCEEECCHHHHHHCCCCCCC-----CCCCC--CHHHHHHHHHHHHHHHH--CCHHHHHHHHHHHHHHHHHHCCC--C
T ss_conf 76532020479999506798877-----88898--98999999999999986--58999999999999999985048--9
Q ss_pred CCCCCCCCCCCEEEEEEC-C-CCHHHHHHHHHHCCCEEEECHHHCCCCCCCCHHHHHCCCCCCCCEEEEEECCCCCHHHH
Q ss_conf 223221103652289857-9-99999999987589699871133886433101467628887476599990788899999
Q gi|254781091|r 289 IYGKDAERISNTCCFSIP-F-LKAEVLQIALDLEGIAVSAGSACSSGKIKKNHVLAAMGFDTSQGAVRVSCGDSTTQEDI 366 (383)
Q Consensus 289 i~~~~~~~~~~i~~~~~~-~-~~~~~v~~~l~~~gI~v~~G~~C~~~~~~~~~vl~~~g~~~~~g~vRiS~~~~nT~~dI 366 (383)
T Consensus 334 ~i~-~VRG~Glm~gve~~~~~~~~~~~~~~~~~~Gll~~~---------------------~~~~~ir~~PPL~it~~ei 391 (404)
T PRK00854 334 IVR-EVRGRGLMLAVELEPEAGGARQYCEALKARGLLAKD---------------------THDHTIRLAPPLVITREQV 391 (404)
T ss_pred CEE-EEEECCEEEEEEEECCHHHHHHHHHHHHHCCEEECC---------------------CCCCEEEEECCCCCCHHHH
T ss_conf 727-664445599999855667799999999979959874---------------------8999899979957899999
Q ss_pred HHHHHHHHHHHH
Q ss_conf 999999999998
Q gi|254781091|r 367 DIFLNALQKIIR 378 (383)
Q Consensus 367 d~l~~~L~~iv~ 378 (383)
T Consensus 392 d~~l~~l~~~La 403 (404)
T PRK00854 392 DWAVSQIAKVLA 403 (404)
T ss_pred HHHHHHHHHHHC
T ss_conf 999999999966