HHsearch alignment for GI: 254781091 and conserved domain: PRK04311
>PRK04311 selenocysteine synthase; Provisional.
Probab=99.69 E-value=7.2e-16 Score=115.84 Aligned_cols=313 Identities=18% Similarity=0.248 Sum_probs=182.7
Q ss_pred CCCCCCHHHHHHHHHHHHHCCCCC-HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEECCHHHHHHHHHHHHHHHCCCC
Q ss_conf 888989899999999996428852-3658999999999999999999729897789886685387644556544210224
Q gi|254781091|r 11 ATAPLLEVVRQSFVKSLDFYGNPS-SVHKEGQKTRLYIEESRRIIADFCGAKPDHVVFTSSATEAANWVLTPHFYQGSHK 89 (383)
Q Consensus 11 attp~~~~v~~a~~~~~~~~~n~~-s~h~~~~~~~~~~e~aR~~ia~~~g~~~~ei~ft~~~T~a~~~~i~~~~~~~~~~ 89 (383)
T Consensus 96 GRapL~~~a~~~v~~~~~~YsnLE~dL~~-G~RG~-R~~~v~~ll~~ltgaE~a--~vVNNNAaAv~L~l~~la------ 165 (465)
T PRK04311 96 GRALLSEAAIEAVTEAARGYSNLEYDLAT-GKRGS-RDRALAALLCELTGAEDA--LVVNNNAAAVLLALNALA------ 165 (465)
T ss_pred CCCCCCHHHHHHHHHHHCCCCHHHHECCC-CCCCC-CHHHHHHHHHHHHCCCEE--EEECCCHHHHHHHHHHHH------
T ss_conf 77778899999999996287215522013-88987-089999999985498737--998284899999999862------
Q ss_pred CCCCEEEECCCCC----CCCCCCC--CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCC--CCCC-
Q ss_conf 5664587333212----2111222--22222222222222221110234553244311356532654034344--4333-
Q gi|254781091|r 90 ISIDSLYISAIEH----PAVYAGG--HFPSHKIHKIPVLSKGIVDIQALTDFLEQRNSTCGIPMIAVMFVNNE--TGVI- 160 (383)
Q Consensus 90 ~~~~~ii~s~~eH----~s~~~~~--~~~~~~v~~v~~~~~g~i~~~~l~~~i~~~t~~~~~~LVs~~~~~n~--tG~i- 160 (383)
T Consensus 166 -~gkEviVSRGelvEIGGsFRiPdim~~sGa~L~EV--GtTNrT~l~DY~~AI~~~Ta-----~llkvH~SN~~i~GFt~ 237 (465)
T PRK04311 166 -AGKEVIVSRGELVEIGGAFRIPDVMRQAGAKLVEV--GTTNRTHLRDYEDAINENTA-----LLLKVHTSNYRIVGFTK 237 (465)
T ss_pred -CCCEEEEECCCEEEECCCCCCHHHHHHCCCEEEEC--CCCCCCCHHHHHHHCCCCCE-----EEEEEECCCCCCCCCCC
T ss_conf -79859996453565267656278998659888743--76788887999986495654-----89999568765467468
Q ss_pred -CCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC-----------C---CCCCEEEEECCCC-CCCCCCCHHHHCCCCCCC
Q ss_conf -21123565203446533444323365544444-----------3---3431068730543-322343201101457420
Q gi|254781091|r 161 -QPIKEIAQIVKEYQGILVVDAVQAAGRIPLSI-----------E---EIKADFLIISSHK-LGAPVGAGALVFREDILL 224 (383)
Q Consensus 161 -~pi~~I~~~~~~~g~~~~vD~aqa~g~~~id~-----------~---~~~~D~~~~S~hK-~~GP~G~G~L~~r~~~~~ 224 (383)
T Consensus 238 ~v~~~eL~~l~~~~~ip~~~Dl--GSG~l-~~~~~~gl~~Ep~v~~~l~~GaDLVtFSGDKLLGGPQ-AGIIvGkk~lI~ 313 (465)
T PRK04311 238 EVSEAELAALGKEHGLPVVVDL--GSGSL-VDLSQYGLPDEPTVQELLAAGVDLVTFSGDKLLGGPQ-AGIIVGKKELIE 313 (465)
T ss_pred CCCHHHHHHHHHHCCCCEEEEC--CCCCC-CCCCCCCCCCCCCHHHHHHCCCCEEEEECCCCCCCCC-CCEEECHHHHHH
T ss_conf 8999999999987599279988--87521-3653126999998899997299889985540147985-433740099999
Q ss_pred ---CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCC----------------CHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf ---12212247742122222221122210012211001----------------00245653210123333444443210
Q gi|254781091|r 225 ---PSPLLRGGDQEKGQRAGTENYAVIGGFAVAAQQMV----------------KDIQKRSSRVFAIRDYLEQELKKLIP 285 (383)
Q Consensus 225 ---~~p~~~Gg~~e~~~~~GT~~~~~i~~~~~al~~~~----------------~~~~~~~~~~~~L~~~l~~~l~~~~~ 285 (383)
T Consensus 314 ~lkknPL~------RAlRvDK---ltLaaLeaTL~~Yl~~~~~~~~IP~l~mLt~~~~~L~~rA~~l~~~l~~~~~~--~ 382 (465)
T PRK04311 314 RLKKHPLK------RALRVDK---LTLAALEATLRLYLNPERLAEKIPTLRLLTRSPEELRARAERLAAALKAALGE--F 382 (465)
T ss_pred HHHHCCCH------HHHCCCH---HHHHHHHHHHHHHHCCCCHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC--C
T ss_conf 99868761------4232599---99999999999995921000117689987599999999999999998742578--4
Q ss_pred CCCCC------C--C-CCCCCCC-EEEEEECCCCHHHHHHHHHHCCCEEEECHHHCCCCCCCCHHHHHCCCCCCCCEEEE
Q ss_conf 00122------3--2-2110365-22898579999999999875896998711338864331014676288874765999
Q gi|254781091|r 286 NIIIY------G--K-DAERISN-TCCFSIPFLKAEVLQIALDLEGIAVSAGSACSSGKIKKNHVLAAMGFDTSQGAVRV 355 (383)
Q Consensus 286 ~~~i~------~--~-~~~~~~~-i~~~~~~~~~~~~v~~~l~~~gI~v~~G~~C~~~~~~~~~vl~~~g~~~~~g~vRi 355 (383)
T Consensus 383 ~v~i~~~~s~vGGGslP~~~lpS~~v~i~~~~~s~~~L~~~LR~~~~PII-------~RI-------------~~d--~~ 440 (465)
T PRK04311 383 AVSVVPSFSQVGGGSLPVDRLPSAALTLTPKGRSLEALAARLRLLPPPVI-------GRI-------------EDG--RL 440 (465)
T ss_pred EEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCEE-------EEE-------------ECC--EE
T ss_conf 28999776645788787887886799985799999999999836999889-------999-------------889--79
Q ss_pred EECC-CCCHHHHHHHHHHHHHHHH
Q ss_conf 9078-8899999999999999998
Q gi|254781091|r 356 SCGD-STTQEDIDIFLNALQKIIR 378 (383)
Q Consensus 356 S~~~-~nT~~dId~l~~~L~~iv~ 378 (383)
T Consensus 441 ~LDlRTi~~~d~~~i~~~l~~il~ 464 (465)
T PRK04311 441 LLDLRTLEEEDEEALAAALLELLN 464 (465)
T ss_pred EEEECCCCHHHHHHHHHHHHHHHH
T ss_conf 999163897899999999999961