HHsearch alignment for GI: 254781091 and conserved domain: PRK05939
>PRK05939 hypothetical protein; Provisional.
Probab=99.61 E-value=6.7e-15 Score=109.98 Aligned_cols=148 Identities=18% Similarity=0.159 Sum_probs=102.9
Q ss_pred HHHHHHHHHHHHHHHCCCCHHHEEEECCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCC---CCCCCCCCCC
Q ss_conf 9999999999999972989778988668538764455654421022456645873332122111222---2222222222
Q gi|254781091|r 43 TRLYIEESRRIIADFCGAKPDHVVFTSSATEAANWVLTPHFYQGSHKISIDSLYISAIEHPAVYAGG---HFPSHKIHKI 119 (383)
Q Consensus 43 ~~~~~e~aR~~ia~~~g~~~~ei~ft~~~T~a~~~~i~~~~~~~~~~~~~~~ii~s~~eH~s~~~~~---~~~~~~v~~v 119 (383)
T Consensus 47 T~~~le~---~la~LEgg~~a-~~~sS-GMaAi~~~l~~ll------~~Gd~il~~~~~YG~t~~l~~~l~~~GI~v~~v 115 (396)
T PRK05939 47 TTAALEA---KITEMEGGVGT-VCFAT-GMAAIAAVFLTLL------RAGDHLVSSQYLFGNTNSLLGTLQGLGVEVTMV 115 (396)
T ss_pred HHHHHHH---HHHHHHCCCEE-EEECC-HHHHHHHHHHHHC------CCCCEEEECCCCCCHHHHHHHHHHHCCEEEEEE
T ss_conf 7999999---99998299749-99657-9999999999835------889889953886922999999865318699998
Q ss_pred CCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
Q ss_conf 22222211102345532443113565326540343444333211235652034465334443233655444443343106
Q gi|254781091|r 120 PVLSKGIVDIQALTDFLEQRNSTCGIPMIAVMFVNNETGVIQPIKEIAQIVKEYQGILVVDAVQAAGRIPLSIEEIKADF 199 (383)
Q Consensus 120 ~~~~~g~i~~~~l~~~i~~~t~~~~~~LVs~~~~~n~tG~i~pi~~I~~~~~~~g~~~~vD~aqa~g~~~id~~~~~~D~ 199 (383)
T Consensus 116 d~~-----d~~~~~~ai~~~Tk-----lv~~EspsNP~l~v~Di~~i~~ia~~~g~~~vVDNT~atP~~-~~Pl~~GaDi 184 (396)
T PRK05939 116 DAT-----DVQQVAAAIRPNTR-----MVFVETIANPGTQVADLAGIGALCRERGLVYVVDNTMTSPWL-FRPKSVGASL 184 (396)
T ss_pred CCC-----CHHHHHHHHCCCCC-----EEEEEECCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHH-CCHHHHCCCE
T ss_conf 897-----98999986185661-----899980899987075899999999983997999777630420-5855638988
Q ss_pred EEECCCCCCCCCC
Q ss_conf 8730543322343
Q gi|254781091|r 200 LIISSHKLGAPVG 212 (383)
Q Consensus 200 ~~~S~hK~~GP~G 212 (383)
T Consensus 185 vvhS~TKyi~Ghs 197 (396)
T PRK05939 185 VINSLSKYIAGHG 197 (396)
T ss_pred EEEECCCCCCCCC
T ss_conf 9983433025887