HHsearch alignment for GI: 254781091 and conserved domain: PRK05968
>PRK05968 hypothetical protein; Provisional.
Probab=99.68 E-value=1.1e-15 Score=114.81 Aligned_cols=294 Identities=17% Similarity=0.123 Sum_probs=159.6
Q ss_pred HHHHHHHHHHHHHHHCCCCHHHEEEECCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCC----CCCCCCCCC
Q ss_conf 9999999999999972989778988668538764455654421022456645873332122111222----222222222
Q gi|254781091|r 43 TRLYIEESRRIIADFCGAKPDHVVFTSSATEAANWVLTPHFYQGSHKISIDSLYISAIEHPAVYAGG----HFPSHKIHK 118 (383)
Q Consensus 43 ~~~~~e~aR~~ia~~~g~~~~ei~ft~~~T~a~~~~i~~~~~~~~~~~~~~~ii~s~~eH~s~~~~~----~~~~~~v~~ 118 (383)
T Consensus 64 T~~~lE~---~la~LEgg~~a-~~~sS-GmaAis~~l~~ll~------~Gd~iv~~~~~YggT~~l~~~~l~~~GI~v~~ 132 (389)
T PRK05968 64 TVRAFEE---MLAKLEGAEDA-RGFAS-GMAAISSTVLSFVE------PGDRIVAVRHVYPDAYRLFGTLLKRMGVEVDY 132 (389)
T ss_pred HHHHHHH---HHHHHHCCCEE-EEECC-HHHHHHHHHHHHHC------CCCEEEECCCCCCCHHHHHHHHHHCCCCEEEE
T ss_conf 6999999---99998299638-88548-89999999999608------99989858876675899999888607846999
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCE
Q ss_conf 22222221110234553244311356532654034344433321123565203446533444323365544444334310
Q gi|254781091|r 119 IPVLSKGIVDIQALTDFLEQRNSTCGIPMIAVMFVNNETGVIQPIKEIAQIVKEYQGILVVDAVQAAGRIPLSIEEIKAD 198 (383)
Q Consensus 119 v~~~~~g~i~~~~l~~~i~~~t~~~~~~LVs~~~~~n~tG~i~pi~~I~~~~~~~g~~~~vD~aqa~g~~~id~~~~~~D 198 (383)
T Consensus 133 vd~~-----d~~~~~~~i-~~T-----klv~~EtpsNP~l~v~DI~~ia~iA~~~g~~~vVDNTfatP~~~-~Pl~~GaD 200 (389)
T PRK05968 133 VDGR-----DEEAVAKAL-PGA-----KLLYLESPTSWVFELQDIAALAALAKRHGVVTVIDNSWASPVFQ-RPITLGVD 200 (389)
T ss_pred ECCC-----CHHHHHHCC-CCC-----CEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHC-CHHHHCCC
T ss_conf 6899-----999999627-687-----28999789998872738999999999839959997786116425-84240798
Q ss_pred EEEECCCCCCCCCC---CHHHHCCCCCCCCCC----CCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHH
Q ss_conf 68730543322343---201101457420122----12247742122222221122210012211001002456532101
Q gi|254781091|r 199 FLIISSHKLGAPVG---AGALVFREDILLPSP----LLRGGDQEKGQRAGTENYAVIGGFAVAAQQMVKDIQKRSSRVFA 271 (383)
Q Consensus 199 ~~~~S~hK~~GP~G---~G~L~~r~~~~~~~p----~~~Gg~~e~~~~~GT~~~~~i~~~~~al~~~~~~~~~~~~~~~~ 271 (383)
T Consensus 201 ivvhS~TKyi~GHsDvl~G~v~~~~~~~~~~~~~~~~~lG~---------~lsP~~a~l~lRGL~TL~lRm~rh~~nA~~ 271 (389)
T PRK05968 201 LVIHSASKYLGGHSDTVAGVVAGSKEHIARINAEAYPYLGG---------KLSPFEAWLLLRGLRTLPLRMKAHEASALL 271 (389)
T ss_pred EEEEECCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCC---------CCCHHHHHHHHCCCCCHHHHHHHHHHHHHH
T ss_conf 79970453446898844269945699999999999986277---------788588899984798699999999999999
Q ss_pred HHHHHHHHHHHHHHCCC-CCCC-----CC---CCCCCEEEEEECCC-CHHHHHHHHHHCCCEEEECHHHC---CCCCC--
Q ss_conf 23333444443210001-2232-----21---10365228985799-99999999875896998711338---86433--
Q gi|254781091|r 272 IRDYLEQELKKLIPNII-IYGK-----DA---ERISNTCCFSIPFL-KAEVLQIALDLEGIAVSAGSACS---SGKIK-- 336 (383)
Q Consensus 272 L~~~l~~~l~~~~~~~~-i~~~-----~~---~~~~~i~~~~~~~~-~~~~v~~~l~~~gI~v~~G~~C~---~~~~~-- 336 (383)
T Consensus 272 vA----~~L~~h-p~V~~V~yPgL~shp~~~l~g~gg~~sf~l~~~~~~~~f~~~L~lf~~a~SlGg~eSLi~~~~~~~~ 346 (389)
T PRK05968 272 IA----RRLKAH-PVVETVCHPALANHPPAGLSGTSGLFSFIFREGVDVRRFADALKLFRLGVSWGGHESLVVPAEVVLQ 346 (389)
T ss_pred HH----HHHHHC-CCCCEEECCCCCCCHHHHCCCCCEEEEEEECCHHHHHHHHHHCCCCEEECCCCCCCCCCCCCHHHCC
T ss_conf 99----999619-9986633888522313421786437999957779999999848807563166864302187066416
Q ss_pred ---CCHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH
Q ss_conf ---1014676288874765999907888999999999999999986
Q gi|254781091|r 337 ---KNHVLAAMGFDTSQGAVRVSCGDSTTQEDIDIFLNALQKIIRT 379 (383)
Q Consensus 337 ---~~~vl~~~g~~~~~g~vRiS~~~~nT~~dId~l~~~L~~iv~~ 379 (383)
T Consensus 347 ~~~~~~~~~~~Gi~--~~liRlSVGlEd~----eDLi~Dl~qAL~~ 386 (389)
T PRK05968 347 QKAQPNSAARFGIS--PRSVRLHVGLEGT----EALWADLEQALAA 386 (389)
T ss_pred CCCCHHHHHHCCCC--CCEEEEEEEECCH----HHHHHHHHHHHHH
T ss_conf 77998899865969--4969999310999----9999999999998