HHsearch alignment for GI: 254781091 and conserved domain: PRK06062
>PRK06062 hypothetical protein; Provisional.
Probab=99.66 E-value=4.3e-14 Score=105.10 Aligned_cols=335 Identities=15% Similarity=0.175 Sum_probs=172.2
Q ss_pred CEECCCCCC------CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEECCHHHHHHH
Q ss_conf 001215788------89898999999999964288523658999999999999999999729897789886685387644
Q gi|254781091|r 4 RVYLDWNAT------APLLEVVRQSFVKSLDFYGNPSSVHKEGQKTRLYIEESRRIIADFCGAKPDHVVFTSSATEAANW 77 (383)
Q Consensus 4 ~iYlD~aat------tp~~~~v~~a~~~~~~~~~n~~s~h~~~~~~~~~~e~aR~~ia~~~g~~~~ei~ft~~~T~a~~~ 77 (383)
T Consensus 36 ~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~~~-----~~~~~~la~~l~~~~p~~~~~v~f~~SGsEAve~ 110 (434)
T PRK06062 36 NRYLDFSSQLVNTNIGHQHPKVVAAIQEQAARLCTVAPAHA-----NDARSEAARLIAERAPGDLSKVFFTNGGADANEH 110 (434)
T ss_pred CEEEEECHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCC-----CHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHH
T ss_conf 99998606178676568979999999999975476467524-----5999999999997477775879983784389999
Q ss_pred HHHHH-HHHCCCCCCCCEEEECCCC-CCCCCCCCCCCCC-----------CCCCC--C------CCC-----CCCCCCHH
Q ss_conf 55654-4210224566458733321-2211122222222-----------22222--2------222-----22111023
Q gi|254781091|r 78 VLTPH-FYQGSHKISIDSLYISAIE-HPAVYAGGHFPSH-----------KIHKI--P------VLS-----KGIVDIQA 131 (383)
Q Consensus 78 ~i~~~-~~~~~~~~~~~~ii~s~~e-H~s~~~~~~~~~~-----------~v~~v--~------~~~-----~g~i~~~~ 131 (383)
T Consensus 111 AlklAr~~tgr-----~~ii~~~~~yHG~t~~a~s~tg~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~ 185 (434)
T PRK06062 111 AVRMARLHTGR-----PKVLSAYRSYHGGTGTAINLTGDPRRWPNDTGNAGVVHFFGPFLYRSSFHATTEEEECERALAH 185 (434)
T ss_pred HHHHHHHHCCC-----CCEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 99999985299-----8376640466788652078406820146888889953415887667667788868999999999
Q ss_pred HHHHHHHHHCCCCCCEEEEECCCCCCCCCCC----HHHHHHHHCCCCCCCCCCCCCC-CCCC--CCCCC--CCCCEEEEE
Q ss_conf 4553244311356532654034344433321----1235652034465334443233-6554--44443--343106873
Q gi|254781091|r 132 LTDFLEQRNSTCGIPMIAVMFVNNETGVIQP----IKEIAQIVKEYQGILVVDAVQA-AGRI--PLSIE--EIKADFLII 202 (383)
Q Consensus 132 l~~~i~~~t~~~~~~LVs~~~~~n~tG~i~p----i~~I~~~~~~~g~~~~vD~aqa-~g~~--~id~~--~~~~D~~~~ 202 (383)
T Consensus 186 l~~~i~~~~~-~~iAAvivEPiqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~TG~GRtG~~fa~e~~gv~PDiv~~ 264 (434)
T PRK06062 186 LERVIALEGP-STIAAIVLESVPGTAGIMVPPPGYLAGVRELCDRHGIVFIADEVMAGFGRTGKWFAIEHFDVVPDLITF 264 (434)
T ss_pred HHHHHHHCCC-CCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCHHEE
T ss_conf 9999985199-977999947867889986687678768999999859506746432278766664210058979762101
Q ss_pred CCCC-CCCCC-CCHHHHCCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHH-HH
Q ss_conf 0543-32234-320110145742012--2122477421222222211222100122110010024565321012333-34
Q gi|254781091|r 203 SSHK-LGAPV-GAGALVFREDILLPS--PLLRGGDQEKGQRAGTENYAVIGGFAVAAQQMVKDIQKRSSRVFAIRDY-LE 277 (383)
Q Consensus 203 S~hK-~~GP~-G~G~L~~r~~~~~~~--p~~~Gg~~e~~~~~GT~~~~~i~~~~~al~~~~~~~~~~~~~~~~L~~~-l~ 277 (383)
T Consensus 265 g--K~l~gG~~Plsav~~~~~i~~~~~~~~~~~g~----T~~G--npla~Aaa~a~L~~i~~--~~l~~~~~~~G~~~l~ 334 (434)
T PRK06062 265 A--KGVNSGYVPLGGVAISEAIADTFADRPYPGGL----TYSG--HPLACAAAVATINAMEE--EGIVENAARIGAEVLG 334 (434)
T ss_pred H--HHHCCCCCCEEEEEECHHHHHHHCCCCCCCCC----CCCC--CHHHHHHHHHHHHHHHH--CCHHHHHHHHHHHHHH
T ss_conf 0--33148877617887459999874226756787----8889--87999999999999973--5899999999999999
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCEEEEEE-CC--------------CCHHHHHHHHHHCCCEEEECHHHCCCCCCCCHHHH
Q ss_conf 4444321000122322110365228985-79--------------99999999987589699871133886433101467
Q gi|254781091|r 278 QELKKLIPNIIIYGKDAERISNTCCFSI-PF--------------LKAEVLQIALDLEGIAVSAGSACSSGKIKKNHVLA 342 (383)
Q Consensus 278 ~~l~~~~~~~~i~~~~~~~~~~i~~~~~-~~--------------~~~~~v~~~l~~~gI~v~~G~~C~~~~~~~~~vl~ 342 (383)
T Consensus 335 ~~L~~l~~~~p~v~-~VRG~GL~~gielv~~~~~~~~~~~~~~~~~~~~~v~~~~~~~Gll~~~---------------- 397 (434)
T PRK06062 335 PGLRELAERHPSVG-EVRGLGVFWALELVADRETREPLVPYGAASAAMAAVVAACKERGLLPFV---------------- 397 (434)
T ss_pred HHHHHHHHHCCCEE-EEEECCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEE----------------
T ss_conf 99999986589868-8861662699998226443555554433279999999999979927833----------------
Q ss_pred HCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCC
Q ss_conf 6288874765999907888999999999999999986237
Q gi|254781091|r 343 AMGFDTSQGAVRVSCGDSTTQEDIDIFLNALQKIIRTSTV 382 (383)
Q Consensus 343 ~~g~~~~~g~vRiS~~~~nT~~dId~l~~~L~~iv~~~~~ 382 (383)
T Consensus 398 ------~gn~irl~PpL~it~~eid~~l~~l~~al~~~~a 431 (434)
T PRK06062 398 ------NGNRIHVVPPCTVTEDEVREGLAILDAALAVADA 431 (434)
T ss_pred ------CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf ------5998999789238899999999999999998765