HHsearch alignment for GI: 254781091 and conserved domain: PRK07543
>PRK07543 consensus.
Probab=99.82 E-value=1.3e-18 Score=132.51 Aligned_cols=321 Identities=15% Similarity=0.102 Sum_probs=191.2
Q ss_pred CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH----CC--CCHHHEEEECCHHHHHHHHHHHHHHHC
Q ss_conf 898989999999999642885236589999999999999999997----29--897789886685387644556544210
Q gi|254781091|r 13 APLLEVVRQSFVKSLDFYGNPSSVHKEGQKTRLYIEESRRIIADF----CG--AKPDHVVFTSSATEAANWVLTPHFYQG 86 (383)
Q Consensus 13 tp~~~~v~~a~~~~~~~~~n~~s~h~~~~~~~~~~e~aR~~ia~~----~g--~~~~ei~ft~~~T~a~~~~i~~~~~~~ 86 (383)
T Consensus 43 f~~p~~i~~a~~~al~~~~~---~Y~~~~G----~~eLR~aia~~~~~~~g~~~~pd~V~vt~G~~~al~~~~~al~--- 112 (400)
T PRK07543 43 FDTPDNIKQAAIAAINAGKT---KYTAVDG----IPELKQAICAKFKRENGLDYKPEQVIVGTGGKQILYNALMATL--- 112 (400)
T ss_pred CCCCHHHHHHHHHHHHCCCC---CCCCCCC----HHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHC---
T ss_conf 99799999999999845999---8989988----0999999999999984899880428992782699999999857---
Q ss_pred CCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCC--
Q ss_conf 2245664587333212211122222222222222222--221110234553244311356532654034344433321--
Q gi|254781091|r 87 SHKISIDSLYISAIEHPAVYAGGHFPSHKIHKIPVLS--KGIVDIQALTDFLEQRNSTCGIPMIAVMFVNNETGVIQP-- 162 (383)
Q Consensus 87 ~~~~~~~~ii~s~~eH~s~~~~~~~~~~~v~~v~~~~--~g~i~~~~l~~~i~~~t~~~~~~LVs~~~~~n~tG~i~p-- 162 (383)
T Consensus 113 ---~pGD~Vlv~~P~Y~~y~~~~~~~g~~~v~v~~~~e~~~~~d~~~le~~i~~~~k-----~iil~~P~NPTG~v~s~~ 184 (400)
T PRK07543 113 ---NPGDEVIIPAPYWVSYPEMVALAGGTPVFVETTAEFGFKLTPEALEAAITPKTK-----WFIFNSPSNPTGAAYTRA 184 (400)
T ss_pred ---CCCCEEEEECCCCCCCHHHHHHHCCEEEEEECCCCCCCCCCHHHHHHHCCCCCE-----EEEECCCCCCCCCCCCHH
T ss_conf ---999989982786655368999808835995246333754384778974786671-----999879989888376416
Q ss_pred -HHHHHHHHCCC-CCCCCCCCCCCC----CC---CCCCCC--CCCCEEEEECCCCCCCCCC--CHHHHCCCCCCCCCCCC
Q ss_conf -12356520344-653344432336----55---444443--3431068730543322343--20110145742012212
Q gi|254781091|r 163 -IKEIAQIVKEY-QGILVVDAVQAA----GR---IPLSIE--EIKADFLIISSHKLGAPVG--AGALVFREDILLPSPLL 229 (383)
Q Consensus 163 -i~~I~~~~~~~-g~~~~vD~aqa~----g~---~~id~~--~~~~D~~~~S~hK~~GP~G--~G~L~~r~~~~~~~p~~ 229 (383)
T Consensus 185 ~l~~l~~~~~~~~~v~iisDEiY~~l~~~~~~~~~~~~~~p~~~~~~i~~~s~SK~~~~~G~RiG~~~~p~~li~~~~~~ 264 (400)
T PRK07543 185 ELKALTDVLVKHPHVWVLTDDMYEHLVYDDFVFTTPAQVEPSLYDRTLTMNGVSKAYAMTGWRIGYAAGPAELIKAMDTI 264 (400)
T ss_pred HHHHHHHHHHHHCCCEECCHHHHHHHHCCCCCCCCHHHCCHHHHCCCCCCCCCCHHCCCCCCCEEEEECCHHHHHHHHHH
T ss_conf 78999998887538603131245664148978899678290221034203774052068343048886789999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEE-EECC-
Q ss_conf 24774212222222112221001221100100245653210123333444443210001223221103652289-8579-
Q gi|254781091|r 230 RGGDQEKGQRAGTENYAVIGGFAVAAQQMVKDIQKRSSRVFAIRDYLEQELKKLIPNIIIYGKDAERISNTCCF-SIPF- 307 (383)
Q Consensus 230 ~Gg~~e~~~~~GT~~~~~i~~~~~al~~~~~~~~~~~~~~~~L~~~l~~~l~~~~~~~~i~~~~~~~~~~i~~~-~~~~- 307 (383)
T Consensus 265 ~-----~~~~~~~~~~~Q~a-a~~al~~~~~~~~~~~~~~~~rrd~~~~~L~~-~~g~~~~~P~g----~fy~~~~~~~~ 333 (400)
T PRK07543 265 Q-----SQSTSNPCSIAQWA-AVEALNGPQDFIPANKKIFQERRDLVVSMLNQ-AKGIDCPTPEG----AFYVYPSCAGL 333 (400)
T ss_pred H-----HHHCCCCCHHHHHH-HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH-CCCCCCCCCCE----EEEEEECCHHH
T ss_conf 9-----75046766099999-99998585999999999999999999999986-77984679986----68982110323
Q ss_pred -----------CCHHHH-HHHHHHCCCEEEECHHHCCCCCCCCHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf -----------999999-99987589699871133886433101467628887476599990788899999999999999
Q gi|254781091|r 308 -----------LKAEVL-QIALDLEGIAVSAGSACSSGKIKKNHVLAAMGFDTSQGAVRVSCGDSTTQEDIDIFLNALQK 375 (383)
Q Consensus 308 -----------~~~~~v-~~~l~~~gI~v~~G~~C~~~~~~~~~vl~~~g~~~~~g~vRiS~~~~nT~~dId~l~~~L~~ 375 (383)
T Consensus 334 ~~~~~p~~~~~~~~~~f~~~ll~~~gV~v~PG~~F--------------G~---~~~~Ri~~a--~~~e~l~ea~~Rl~~ 394 (400)
T PRK07543 334 IGKTTPSGKVIETDEDFVTELLETEGVAVVHGSAF--------------GL---GPNFRISYA--TSDELLEEACKRIQR 394 (400)
T ss_pred HHCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCC--------------CC---CCCEEEEEC--CCHHHHHHHHHHHHH
T ss_conf 20037556767999999999998499999847010--------------89---999899975--989999999999999
Q ss_pred HHHHHC
Q ss_conf 998623
Q gi|254781091|r 376 IIRTST 381 (383)
Q Consensus 376 iv~~~~ 381 (383)
T Consensus 395 f~~~lr 400 (400)
T PRK07543 395 FCASLR 400 (400)
T ss_pred HHHHCC
T ss_conf 999658