HHsearch alignment for GI: 254781091 and conserved domain: PRK07865
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed.
Probab=99.70 E-value=3e-15 Score=112.11 Aligned_cols=300 Identities=17% Similarity=0.187 Sum_probs=163.3
Q ss_pred CCCCHHHHHHHHHHHHH--CCCCCHHHHHHHHHHHHHHHHHHHHHHHC----C---CCHHHEEEECCHHHHHHHHHHHHH
Q ss_conf 89898999999999964--28852365899999999999999999972----9---897789886685387644556544
Q gi|254781091|r 13 APLLEVVRQSFVKSLDF--YGNPSSVHKEGQKTRLYIEESRRIIADFC----G---AKPDHVVFTSSATEAANWVLTPHF 83 (383)
Q Consensus 13 tp~~~~v~~a~~~~~~~--~~n~~s~h~~~~~~~~~~e~aR~~ia~~~----g---~~~~ei~ft~~~T~a~~~~i~~~~ 83 (383)
T Consensus 39 ~p~P~~v~~a~~~a~~~~~Y~~~~G-----------~~~LReAIa~~~~~~~g~~~~~~~~V~vt~Ga~~~l~~l~~~l- 106 (364)
T PRK07865 39 DPVPPVIQEALAAAADAPGYPTTAG-----------TPELREAIVAWLARRYGVTGLDPAAVLPVIGSKELVAWLPTLL- 106 (364)
T ss_pred CCCCHHHHHHHHHHCCCCCCCCCCC-----------CHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHH-
T ss_conf 9989999999996248999899888-----------7999999999999983989899687997698899999999997-
Q ss_pred HHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCC-
Q ss_conf 2102245664587333212211122222222222222222221110234553244311356532654034344433321-
Q gi|254781091|r 84 YQGSHKISIDSLYISAIEHPAVYAGGHFPSHKIHKIPVLSKGIVDIQALTDFLEQRNSTCGIPMIAVMFVNNETGVIQP- 162 (383)
Q Consensus 84 ~~~~~~~~~~~ii~s~~eH~s~~~~~~~~~~~v~~v~~~~~g~i~~~~l~~~i~~~t~~~~~~LVs~~~~~n~tG~i~p- 162 (383)
T Consensus 107 ----~~~pGD~Vlip~P~Yp~y~~~~~~~g~~~--v~--------~d~~~~~~~~~-----~~li~lnsP~NPTG~v~s~ 167 (364)
T PRK07865 107 ----GLGPGDVVVVPELAYPTYEVGARLAGATV--VR--------ADSLTELGPQT-----PALIWLNSPSNPTGRVLGV 167 (364)
T ss_pred ----CCCCCCEEEECCCCCCHHHHHHHHCCCEE--EE--------CCCHHHCCCCC-----CEEEEECCCCCCCCCCCCH
T ss_conf ----07999989986678601999999819865--61--------07887759877-----5299989996985511769
Q ss_pred --HHHHHHHHCCCCCCCCCCCCCCC----CCCC--CCCCCCCCE----EEEECCCCCCCCCC--CHHHHCCCCCCCCCCC
Q ss_conf --12356520344653344432336----5544--444334310----68730543322343--2011014574201221
Q gi|254781091|r 163 --IKEIAQIVKEYQGILVVDAVQAA----GRIP--LSIEEIKAD----FLIISSHKLGAPVG--AGALVFREDILLPSPL 228 (383)
Q Consensus 163 --i~~I~~~~~~~g~~~~vD~aqa~----g~~~--id~~~~~~D----~~~~S~hK~~GP~G--~G~L~~r~~~~~~~p~ 228 (383)
T Consensus 168 e~l~~l~~la~~~~i~vi~DE~Y~~l~~~~~~~s~l~p~~~~~~~~~vi~i~S~SK~~~~~GlRiG~i~~~~~li~~l~~ 247 (364)
T PRK07865 168 DHLRKVVAWARERGAVVASDECYLGLGWDAEPVSVLDPRVCGGDHTGLLAVHSLSKQSNLAGYRAGFVAGDPALVAELLA 247 (364)
T ss_pred HHHHHHHHHHHHCEEEEEECCCHHHHCCCCCCCCCCCHHHCCCCCCCEEEEECCCCCCCCCCCEEEEEECCHHHHHHHHH
T ss_conf 99999999977671899825425764258988651386442777575799943652306777448999679999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCC
Q ss_conf 22477421222222211222100122110010024565321012333344444321000122322110365228985799
Q gi|254781091|r 229 LRGGDQEKGQRAGTENYAVIGGFAVAAQQMVKDIQKRSSRVFAIRDYLEQELKKLIPNIIIYGKDAERISNTCCFSIPFL 308 (383)
Q Consensus 229 ~~Gg~~e~~~~~GT~~~~~i~~~~~al~~~~~~~~~~~~~~~~L~~~l~~~l~~~~~~~~i~~~~~~~~~~i~~~~~~~~ 308 (383)
T Consensus 248 ~~----~-~~~~~~~~~~Q-~a~~aal~~-~~~~~~~~~~y~~rr~~l~~~L~~~--g~~~~~--p~--G~fylw~~~~~ 314 (364)
T PRK07865 248 VR----K-HAGMMVPAPVQ-AAMVAALGD-DAHVREQRERYARRRAVLLPALEAA--GFTVDH--SE--AGLYLWATRGE 314 (364)
T ss_pred HH----H-HCCCCCCHHHH-HHHHHHHCC-CHHHHHHHHHHHHHHHHHHHHHHHC--CCEECC--CC--CEEEEEEECCC
T ss_conf 99----8-55023789999-999999579-3999999999999999999999867--976626--99--22799888899
Q ss_pred CHHHHHHHHHHCCCEEEECHHHCCCCCCCCHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHH
Q ss_conf 99999999875896998711338864331014676288874765999907888999999999999
Q gi|254781091|r 309 KAEVLQIALDLEGIAVSAGSACSSGKIKKNHVLAAMGFDTSQGAVRVSCGDSTTQEDIDIFLNAL 373 (383)
Q Consensus 309 ~~~~v~~~l~~~gI~v~~G~~C~~~~~~~~~vl~~~g~~~~~g~vRiS~~~~nT~~dId~l~~~L 373 (383)
T Consensus 315 ~~~~~~~~l~e~gV~v~PG~~F--------------g~-~g~~~vRls~~--~~~e~l~ea~~RL 362 (364)
T PRK07865 315 DCWDTVAWLAERGILVAPGDFY--------------GP-AGAQHVRVALT--ATDERIAAAVERL 362 (364)
T ss_pred CHHHHHHHHHHCCEEEECCCCC--------------CC-CCCCEEEEEEC--CCHHHHHHHHHHH
T ss_conf 9999999999799899188743--------------68-99986999965--9899999999986