HHsearch alignment for GI: 254781091 and conserved domain: PRK08555

>PRK08555 consensus.
Probab=99.63  E-value=3.8e-13  Score=99.37  Aligned_cols=334  Identities=19%  Similarity=0.256  Sum_probs=174.5

Q ss_pred             CEECCCCCC------CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCH-HHEEEECCHHHHHH
Q ss_conf             001215788------89898999999999964288523658999999999999999999729897-78988668538764
Q gi|254781091|r    4 RVYLDWNAT------APLLEVVRQSFVKSLDFYGNPSSVHKEGQKTRLYIEESRRIIADFCGAKP-DHVVFTSSATEAAN   76 (383)
Q Consensus         4 ~iYlD~aat------tp~~~~v~~a~~~~~~~~~n~~s~h~~~~~~~~~~e~aR~~ia~~~g~~~-~ei~ft~~~T~a~~   76 (383)
T Consensus        52 ~~ylD~~~g~~~~~lGh~~p~i~~Ai~~ql~~l~~~~~~-~~--~~~~~~~la-e~L~~~~p~~~~~~v~f~~SGSEAvE  127 (443)
T PRK08555         52 NVYLDFSSGIGVNNLGHSHPRVIEAVEEQLHKLWHAAGT-DF--YNEYQVELA-KKLVEIAPGDFEKKVFFSNSGTEANE  127 (443)
T ss_pred             CEEEEECCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCC-CC--CCHHHHHHH-HHHHHHCCCCCCCEEEEECCHHHHHH
T ss_conf             999990532764212489799999999998617674656-43--688999999-99998577565655998087788999


Q ss_pred             HHHHHHHHHCCCCCCCCEEEECCC-CCCCCCCCCCCCCC-------------CCCCCCCCC--------CCCCC------
Q ss_conf             455654421022456645873332-12211122222222-------------222222222--------22111------
Q gi|254781091|r   77 WVLTPHFYQGSHKISIDSLYISAI-EHPAVYAGGHFPSH-------------KIHKIPVLS--------KGIVD------  128 (383)
Q Consensus        77 ~~i~~~~~~~~~~~~~~~ii~s~~-eH~s~~~~~~~~~~-------------~v~~v~~~~--------~g~i~------  128 (383)
T Consensus       128 ~AiklAr~~----tgr~~ii~~~~~yHG~t~g~~s~t~~~~~~~~~~~p~~~~~~~vp~p~~~r~p~~~~~~~~~~~~~~  203 (443)
T PRK08555        128 AALKIAKWY----TGRKMFIAFIGAFHGRTQGSLSLTASKPVQRSGFFPTMPGVEHVPYPNPYRNPWGIDGYENPDELVN  203 (443)
T ss_pred             HHHHHHHHH----CCCCEEEEEECCCCCCCCCCEEEECCCCHHCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHH
T ss_conf             999998873----7998899995870789721168725850110477899999368168862246445666569999999


Q ss_pred             --CHHHHHHHHHHHC-CCCCCEEEEECCCCCCCCCCC----HHHHHHHHCCCCCCCCCCCCCC-CCCC--CCCCCC--CC
Q ss_conf             --0234553244311-356532654034344433321----1235652034465334443233-6554--444433--43
Q gi|254781091|r  129 --IQALTDFLEQRNS-TCGIPMIAVMFVNNETGVIQP----IKEIAQIVKEYQGILVVDAVQA-AGRI--PLSIEE--IK  196 (383)
Q Consensus       129 --~~~l~~~i~~~t~-~~~~~LVs~~~~~n~tG~i~p----i~~I~~~~~~~g~~~~vD~aqa-~g~~--~id~~~--~~  196 (383)
T Consensus       204 ~~~~~ie~~i~~~~~~~~~iAavi~EPi~g~gG~~~pp~~yl~~l~~lc~~~gillI~DEV~tGfGRtG~~fa~e~~gv~  283 (443)
T PRK08555        204 RVIDYIEEYLFEHYVPPEEVAGIFFEPIQGEGGYVVPPKNFFKELKKLADKYGILLIDDEVQMGLGRTGKMFAIEHFGVE  283 (443)
T ss_pred             HHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCEECCCCCC
T ss_conf             99999999998625798988999995876888987588788789999999749469635441278702474123168889


Q ss_pred             CEEEEECCCC-CCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHH
Q ss_conf             1068730543-322343201101457420122122477421222222211222100122110010024565321012333
Q gi|254781091|r  197 ADFLIISSHK-LGAPVGAGALVFREDILLPSPLLRGGDQEKGQRAGTENYAVIGGFAVAAQQMVKDIQKRSSRVFAIRDY  275 (383)
Q Consensus       197 ~D~~~~S~hK-~~GP~G~G~L~~r~~~~~~~p~~~Gg~~e~~~~~GT~~~~~i~~~~~al~~~~~~~~~~~~~~~~L~~~  275 (383)
T Consensus       284 PDiv~~g--Kgl~~G~Pl~av~~~~e~~~~~~~~h~~-----T~~g--npla~aaa~a~L~~i~---e~l~~~~~~~g~~  351 (443)
T PRK08555        284 PDIITLA--KALGGGIPIGATIFRADLDFKKPGLHSN-----TFGG--NALASAAGLAVIEEIK---EGLLENVQKLGKY  351 (443)
T ss_pred             CCEEEEC--CCCCCCCCEEEEEEHHHHCCCCCCCCCC-----CCCC--CHHHHHHHHHHHHHHH---HHHHHHHHHHHHH
T ss_conf             9889977--4244887508999824535577777376-----8885--4899999999999999---7799999999999


Q ss_pred             HHHHHHHHHHCCCCCCCCCCCCCCEEEEEEC-C-----CC---HHHHHHHHHHCCCEEEECHHHCCCCCCCCHHHHHCCC
Q ss_conf             3444443210001223221103652289857-9-----99---9999999875896998711338864331014676288
Q gi|254781091|r  276 LEQELKKLIPNIIIYGKDAERISNTCCFSIP-F-----LK---AEVLQIALDLEGIAVSAGSACSSGKIKKNHVLAAMGF  346 (383)
Q Consensus       276 l~~~l~~~~~~~~i~~~~~~~~~~i~~~~~~-~-----~~---~~~v~~~l~~~gI~v~~G~~C~~~~~~~~~vl~~~g~  346 (383)
T Consensus       352 l~~~L~~l~~~~~~v~d-vRG~Gl~~gielv~~~~~~~~~~~~~~~i~~~~~~~Gll~~~-----------------~g-  412 (443)
T PRK08555        352 FRERLEELKEKYEIIGD-VRGLGLAWAIEFVKDRKTKEPNPKLRDRVVVEAFKRGLILLG-----------------CG-  412 (443)
T ss_pred             HHHHHHHHHHCCCCEEE-ECCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEE-----------------CC-
T ss_conf             99999998861997787-232667999998237765677989999999999978909973-----------------79-


Q ss_pred             CCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             874765999907888999999999999999986
Q gi|254781091|r  347 DTSQGAVRVSCGDSTTQEDIDIFLNALQKIIRT  379 (383)
Q Consensus       347 ~~~~g~vRiS~~~~nT~~dId~l~~~L~~iv~~  379 (383)
T Consensus       413 ---~n~ir~~PPL~it~~eid~~~~~l~~al~~  442 (443)
T PRK08555        413 ---KSAIRLIPPLIISEEEAKIGLEILEEAIKV  442 (443)
T ss_pred             ---CCEEEEECCCCCCHHHHHHHHHHHHHHHHH
T ss_conf             ---998999779438899999999999999963