HHsearch alignment for GI: 254781091 and conserved domain: PRK08776
>PRK08776 cystathionine gamma-synthase; Provisional.
Probab=99.70 E-value=8.5e-16 Score=115.40 Aligned_cols=299 Identities=18% Similarity=0.160 Sum_probs=160.8
Q ss_pred HHHHHHHHHHHHHHHCCCCHHHEEEECCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCC----CCCCCCC
Q ss_conf 999999999999997298977898866853876445565442102245664587333212211122222----2222222
Q gi|254781091|r 43 TRLYIEESRRIIADFCGAKPDHVVFTSSATEAANWVLTPHFYQGSHKISIDSLYISAIEHPAVYAGGHF----PSHKIHK 118 (383)
Q Consensus 43 ~~~~~e~aR~~ia~~~g~~~~ei~ft~~~T~a~~~~i~~~~~~~~~~~~~~~ii~s~~eH~s~~~~~~~----~~~~v~~ 118 (383)
T Consensus 61 T~~~lE~---~lA~LEgg~~a-~~~-sSGmaAi~~~l~~ll~------~GDhiv~~~~~YGgT~~l~~~~~~~~gi~~~~ 129 (405)
T PRK08776 61 TRDLLGE---ALAELEGGAGG-VIT-STGMGAINLVLNALLQ------PGDTLVVPHDAYGGSWRLFNALAKKGHFALIT 129 (405)
T ss_pred HHHHHHH---HHHHHHCCCCE-EEE-CCHHHHHHHHHHHHHC------CCCEEEECCCCCHHHHHHHHHHHHHCCEEEEE
T ss_conf 8999999---99998299968-994-6799999999999738------99989986886117999999987548889999
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCE
Q ss_conf 22222221110234553244311356532654034344433321123565203446533444323365544444334310
Q gi|254781091|r 119 IPVLSKGIVDIQALTDFLEQRNSTCGIPMIAVMFVNNETGVIQPIKEIAQIVKEYQGILVVDAVQAAGRIPLSIEEIKAD 198 (383)
Q Consensus 119 v~~~~~g~i~~~~l~~~i~~~t~~~~~~LVs~~~~~n~tG~i~pi~~I~~~~~~~g~~~~vD~aqa~g~~~id~~~~~~D 198 (383)
T Consensus 130 vd~-----~d~~~~~~~i~~~Tk-----lv~~EtpsNP~l~v~Di~~ia~iA~~~g~~~vVDNTfatP~~-~~Pl~~GaD 198 (405)
T PRK08776 130 ADL-----TDPRSLADALAQSPK-----LVLIETPSNPLLRITDLRFVIEAAHKVGALTVVDNTFLSPAL-QKPLEFGAD 198 (405)
T ss_pred ECC-----CCHHHHHHHCCCCCE-----EEEEECCCCCCCEEECCHHHHHHHHHCCCEEEEECCCCCCCC-CCHHHHCCC
T ss_conf 689-----998999974377765-----999988999988602759999999873997999799764002-682652797
Q ss_pred EEEECCCCCCCCCC---CHHHHCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHH
Q ss_conf 68730543322343---20110145742012212247742122222-221122210012211001002456532101233
Q gi|254781091|r 199 FLIISSHKLGAPVG---AGALVFREDILLPSPLLRGGDQEKGQRAG-TENYAVIGGFAVAAQQMVKDIQKRSSRVFAIRD 274 (383)
Q Consensus 199 ~~~~S~hK~~GP~G---~G~L~~r~~~~~~~p~~~Gg~~e~~~~~G-T~~~~~i~~~~~al~~~~~~~~~~~~~~~~L~~ 274 (383)
T Consensus 199 ivihS~TKyl~GHsDvl~G~vv~~~~~~~-~~l~~-----~~~~~G~~~sP~da~L~lRGLkTL~lRm~r~~~n----A~ 268 (405)
T PRK08776 199 LVLHSTTKYINGHSDVVGGAVVARDAALH-QQLVW-----WANALGLTGSPFDAFLTLRGLRTLDARLRVHQEN----AD 268 (405)
T ss_pred EEEEECCEEECCCCCCCCCCCCCCCHHHH-HHHHH-----HHHHCCCCCCCHHHHHHHCCCCCHHHHHHHHHHH----HH
T ss_conf 89997260432786530562226888999-99999-----9986088888335788864578899999999999----99
Q ss_pred HHHHHHHHHHHCCC-CCCCC-C------------CCCCCEEEEEECCCCH--HHHHHHHHHCCCEEEECHH----HCCCC
Q ss_conf 33444443210001-22322-1------------1036522898579999--9999998758969987113----38864
Q gi|254781091|r 275 YLEQELKKLIPNII-IYGKD-A------------ERISNTCCFSIPFLKA--EVLQIALDLEGIAVSAGSA----CSSGK 334 (383)
Q Consensus 275 ~l~~~l~~~~~~~~-i~~~~-~------------~~~~~i~~~~~~~~~~--~~v~~~l~~~gI~v~~G~~----C~~~~ 334 (383)
T Consensus 269 ~lA~~L~~h-p~V~~V~YPgL~shp~h~la~r~~~G~Ggm~Sf~l~~~~~~~~~f~d~l~lf~~a~SlGg~eSLi~~P~~ 347 (405)
T PRK08776 269 AIAALLDGH-AAVNQVYFPGLASHPGHALAARQQKGFGAMLSFELEGGEAAVRAFVDGLRYFTLAESLGGVESLIAHPAS 347 (405)
T ss_pred HHHHHHHHC-CCCCEEECCCCCCCCCHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHCCCCEEEECCCCCCCEEECCCC
T ss_conf 999999709-8968688988889816789986489986526888457399999999808836252153765413027754
Q ss_pred CC----CCHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 33----1014676288874765999907888999999999999999
Q gi|254781091|r 335 IK----KNHVLAAMGFDTSQGAVRVSCGDSTTQEDIDIFLNALQKI 376 (383)
Q Consensus 335 ~~----~~~vl~~~g~~~~~g~vRiS~~~~nT~~dId~l~~~L~~i 376 (383)
T Consensus 348 ~th~~~~~e~r~~~Gi--~~~liRlSvGlEd~~DLi~DL~qAL~~a 391 (405)
T PRK08776 348 MTHAAMTAEARAAAGI--SDGLLRLSVGIESAEDLLIDLRAGLARA 391 (405)
T ss_pred CCCCCCCHHHHHHCCC--CCCEEEEEEECCCHHHHHHHHHHHHHHH
T ss_conf 4664589999986698--9396999950099999999999999999