HHsearch alignment for GI: 254781091 and conserved domain: PRK13580
>PRK13580 serine hydroxymethyltransferase; Provisional.
Probab=99.80 E-value=5.3e-18 Score=128.77 Aligned_cols=338 Identities=17% Similarity=0.166 Sum_probs=209.3
Q ss_pred CCCCCCHHHHHHHHHHHH-HC--CCCCHHHHHHHHHHHHHHH-HHHHHHHHCCCCHHHEEEECCHHHHHHHHHHHHHHH-
Q ss_conf 888989899999999996-42--8852365899999999999-999999972989778988668538764455654421-
Q gi|254781091|r 11 ATAPLLEVVRQSFVKSLD-FY--GNPSSVHKEGQKTRLYIEE-SRRIIADFCGAKPDHVVFTSSATEAANWVLTPHFYQ- 85 (383)
Q Consensus 11 attp~~~~v~~a~~~~~~-~~--~n~~s~h~~~~~~~~~~e~-aR~~ia~~~g~~~~ei~ft~~~T~a~~~~i~~~~~~- 85 (383)
T Consensus 59 SEN~~S~aV~ea~gS~ltnKYAEGyPG~RYY~Gce~vD~iE~lai~rak~LF~a~~aNVQP~-SGs~AN~avy~All~~~ 137 (493)
T PRK13580 59 SENYSSLAVQLAMGNLLTDKYAEGTPGHRFYAGCQNVDAIEWEAAEHARELFGAEHAYVQPH-SGADANLVAFWAILAHK 137 (493)
T ss_pred CCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC-CCHHHHHHHHHHHHHHC
T ss_conf 48878899999856731012458899863237757799999999999999838985032778-76077899999986000
Q ss_pred ----C--------------------CCCCCCCEEEECCCCCCCCC---CCCCCC--CCCCCCCCCC-CCCCCCCHHHHHH
Q ss_conf ----0--------------------22456645873332122111---222222--2222222222-2221110234553
Q gi|254781091|r 86 ----G--------------------SHKISIDSLYISAIEHPAVY---AGGHFP--SHKIHKIPVL-SKGIVDIQALTDF 135 (383)
Q Consensus 86 ----~--------------------~~~~~~~~ii~s~~eH~s~~---~~~~~~--~~~v~~v~~~-~~g~i~~~~l~~~ 135 (383)
T Consensus 138 v~~Pgl~~~g~~~~~~l~~~~~~~~~~~~g~d~imgl~L~~GGHLTHG~~~n~sg~~~~~~~Y~vd~et~~IDyD~~~~~ 217 (493)
T PRK13580 138 VEAPALSKLGAKTVNDLTEEEWEELRAELGNQRLLGMSLDSGGHLTHGFRPNISGKMFRQRSYGVDPDTGLLDYDEIAAL 217 (493)
T ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHH
T ss_conf 24864223343332323301222220246788687058887866336996563422688787536633484089999999
Q ss_pred HHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC-----CC-CCCEEEEECCCC-CC
Q ss_conf 244311356532654034344433321123565203446533444323365544444-----33-431068730543-32
Q gi|254781091|r 136 LEQRNSTCGIPMIAVMFVNNETGVIQPIKEIAQIVKEYQGILVVDAVQAAGRIPLSI-----EE-IKADFLIISSHK-LG 208 (383)
Q Consensus 136 i~~~t~~~~~~LVs~~~~~n~tG~i~pi~~I~~~~~~~g~~~~vD~aqa~g~~~id~-----~~-~~~D~~~~S~hK-~~ 208 (383)
T Consensus 218 A~~~k----PKlII~-G~SaY-pr~idf~~freIAdeVGA~LmaDiAHiaGLVA~g~~~~h~sP~~~ADvVTtTTHKTLr 291 (493)
T PRK13580 218 AREFK----PLVLVA-GYSAY-PRRVNFAKLREIADEVGAVLMVDMAHFAGLVAGKVFTGDEDPVPHADIVTTTTHKTLR 291 (493)
T ss_pred HHHCC----CCEEEE-CCCCC-CCCCCHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCC
T ss_conf 99749----988997-76246-5644879999999971978981056676776425456899951335157512344567
Q ss_pred CCCCCHHHHCCCCCCCC----CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCC-HHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 23432011014574201----22122477421222222211222100122110010-02456532101233334444432
Q gi|254781091|r 209 APVGAGALVFREDILLP----SPLLRGGDQEKGQRAGTENYAVIGGFAVAAQQMVK-DIQKRSSRVFAIRDYLEQELKKL 283 (383)
Q Consensus 209 GP~G~G~L~~r~~~~~~----~p~~~Gg~~e~~~~~GT~~~~~i~~~~~al~~~~~-~~~~~~~~~~~L~~~l~~~l~~~ 283 (383)
T Consensus 292 GPRG-GiIl~~~e~~~~Id~avPg~Q----------GGP~~h~IAakAvaf~EA~~peFk~Y~~qVv~NAkaLA~~L~~~ 360 (493)
T PRK13580 292 GPRG-GLVLAKKEYAEAVDKGCPLVL----------GGPLPHVMAAKAVALAEARTPDFKKYAHRVVDNARALAEGFLKR 360 (493)
T ss_pred CCCC-CEEEECHHHHHHHCCCCCCCC----------CCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 8885-068846477876510387546----------87277699999999999727778999999999999999999988
Q ss_pred HHCCCCCCCCCCCCCCEEEEEE--CCCCHHHHHHHHHHCCCEEEECHHHCCCCCCCCHHHHHCCCCCCCCEEEEEECCCC
Q ss_conf 1000122322110365228985--79999999999875896998711338864331014676288874765999907888
Q gi|254781091|r 284 IPNIIIYGKDAERISNTCCFSI--PFLKAEVLQIALDLEGIAVSAGSACSSGKIKKNHVLAAMGFDTSQGAVRVSCGDST 361 (383)
Q Consensus 284 ~~~~~i~~~~~~~~~~i~~~~~--~~~~~~~v~~~l~~~gI~v~~G~~C~~~~~~~~~vl~~~g~~~~~g~vRiS~~~~n 361 (383)
T Consensus 361 --G~~vvsGGTd--nHlvLvDl~~~g~tG~~ae~~Le~~gI~vNK-------N~iP~D~~~----p~~~SGIRiGtpa~T 425 (493)
T PRK13580 361 --GARLVTGGTD--NHLLLIDVTSFGLTGRQAEDALLDVGIVTNR-------NSIPSDPNG----AWYTSGIRLGTPALT 425 (493)
T ss_pred --CCEEECCCCC--CCEEEEECCCCCCCHHHHHHHHHHCCEEEEC-------CCCCCCCCC----CCCCCCCEECCHHHH
T ss_conf --9948528888--7758885677899889999999877938716-------889899988----988864111666676
Q ss_pred C----HHHHHHHHHHHHHHHHHHC
Q ss_conf 9----9999999999999998623
Q gi|254781091|r 362 T----QEDIDIFLNALQKIIRTST 381 (383)
Q Consensus 362 T----~~dId~l~~~L~~iv~~~~ 381 (383)
T Consensus 426 tRGm~e~em~~ia~~I~~~l~~~~ 449 (493)
T PRK13580 426 TLGMGSDEMDEVAELIVKVLRNTT 449 (493)
T ss_pred HCCCCHHHHHHHHHHHHHHHHCCC
T ss_conf 189998999999999999995524