HHsearch alignment for GI: 254781091 and conserved domain: TIGR01885
>TIGR01885 Orn_aminotrans ornithine--oxo-acid transaminase; InterPro: IPR010164 Ornithine aminotransferase catalyses the conversion of L-ornithine and a 2-oxo acid to L-glutamate 5-semialdehyde and an L-amino acid. This enzyme is found in low-GC bacteria, where it is responsible for the fourth step in arginine biosynthesis, and in the mitochondrial matrix of eukaryotes, where it controls L-ornithine levels in tissues. In human hereditary ornithine aminotransferase deficiency, the elevated levels of intraocular concentrations of ornithine are responsible for gyrate atrophy, which affects the CNS and peripheral nervous system ; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding.
Probab=99.63 E-value=4.9e-14 Score=104.74 Aligned_cols=330 Identities=18% Similarity=0.240 Sum_probs=207.3
Q ss_pred CEECCCCCC-C-----CCCHHHHHHHHHHHHHCCCCCH-HHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEECCHHHHHH
Q ss_conf 001215788-8-----9898999999999964288523-65899999999999999999972989778988668538764
Q gi|254781091|r 4 RVYLDWNAT-A-----PLLEVVRQSFVKSLDFYGNPSS-VHKEGQKTRLYIEESRRIIADFCGAKPDHVVFTSSATEAAN 76 (383)
Q Consensus 4 ~iYlD~aat-t-----p~~~~v~~a~~~~~~~~~n~~s-~h~~~~~~~~~~e~aR~~ia~~~g~~~~ei~ft~~~T~a~~ 76 (383)
T Consensus 42 ~~Y~D~LSaYSavNqGHchP~i~~Al~~Q~~KlTL~Sraf~------nd~lg~~~~~~t~LfgGk~~~vL~mNTGaEAvE 115 (426)
T TIGR01885 42 REYLDFLSAYSAVNQGHCHPKIVNALKNQADKLTLTSRAFH------NDVLGEFAKYLTKLFGGKYEKVLPMNTGAEAVE 115 (426)
T ss_pred CEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHH------CCHHHHHHHHHHHHCCCCCCEEECCCCCHHHHH
T ss_conf 88641002554401376771689999999851371027660------603578999999754995105604568734799
Q ss_pred HHHHHH-HHHCC--CCCCCC-EEEECCCCCC-CCCCCCC-------------------CCCCCCCCCCCCCCCCCCCHHH
Q ss_conf 455654-42102--245664-5873332122-1112222-------------------2222222222222221110234
Q gi|254781091|r 77 WVLTPH-FYQGS--HKISID-SLYISAIEHP-AVYAGGH-------------------FPSHKIHKIPVLSKGIVDIQAL 132 (383)
Q Consensus 77 ~~i~~~-~~~~~--~~~~~~-~ii~s~~eH~-s~~~~~~-------------------~~~~~v~~v~~~~~g~i~~~~l 132 (383)
T Consensus 116 tA~KLAR~WgY~~K~ip~~kA~ii~~~GNFhGRTlgA~S~Std~e~~k~~FGPflPnvasGhgf~~iPYg-----d~EAl 190 (426)
T TIGR01885 116 TALKLARKWGYEVKGIPRNKAKIIAASGNFHGRTLGAVSASTDSETSKKGFGPFLPNVASGHGFRKIPYG-----DLEAL 190 (426)
T ss_pred HHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCC-----CHHHH
T ss_conf 9999999744135785576238998538873303544320267212006787967743357852115588-----87899
Q ss_pred HHHHHHH-HCCCCCCEEEEECCCCCCCCCCC----HHHHHHHHCCCCCCCCCCCCCCC-C----CCCCCCCC--CCCEEE
Q ss_conf 5532443-11356532654034344433321----12356520344653344432336-5----54444433--431068
Q gi|254781091|r 133 TDFLEQR-NSTCGIPMIAVMFVNNETGVIQP----IKEIAQIVKEYQGILVVDAVQAA-G----RIPLSIEE--IKADFL 200 (383)
Q Consensus 133 ~~~i~~~-t~~~~~~LVs~~~~~n~tG~i~p----i~~I~~~~~~~g~~~~vD~aqa~-g----~~~id~~~--~~~D~~ 200 (383)
T Consensus 191 ~~aL~~P~~~GDnVAA~i~EPIQGEAGvvvPp~gYl~~V~~LC~~~nVLfI~DEiQTGlGRTGk~la~dh~~aev~PDi~ 270 (426)
T TIGR01885 191 RKALQDPKKTGDNVAAFILEPIQGEAGVVVPPPGYLPGVRALCKEHNVLFIADEIQTGLGRTGKLLACDHENAEVKPDIV 270 (426)
T ss_pred HHHHHCCCCCCCCEEEEEECCCCCCCCEEECCCCHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHCCCCEECCCCE
T ss_conf 99972757788868999950403544368489635789999865518728982000384025453310105882045033
Q ss_pred EECCCC-CCC-CCCCHHHHCCCCCCCC---CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHH
Q ss_conf 730543-322-3432011014574201---22122477421222222211222100122110010024565321012333
Q gi|254781091|r 201 IISSHK-LGA-PVGAGALVFREDILLP---SPLLRGGDQEKGQRAGTENYAVIGGFAVAAQQMVKDIQKRSSRVFAIRDY 275 (383)
Q Consensus 201 ~~S~hK-~~G-P~G~G~L~~r~~~~~~---~p~~~Gg~~e~~~~~GT~~~~~i~~~~~al~~~~~~~~~~~~~~~~L~~~ 275 (383)
T Consensus 271 lLG--KALsGGv~PiSa~la~~dim~vl~PGPF~H------GSTfGGNPLAcava-iAaLeVL~~--ekL~~~A~~lG~~ 339 (426)
T TIGR01885 271 LLG--KALSGGVYPISAVLADDDIMSVLKPGPFEH------GSTFGGNPLACAVA-IAALEVLEE--EKLAERADQLGDM 339 (426)
T ss_pred EEE--HHHCCCCCCEEEEEECCCEEECCCCCCCCC------CCCCCCCHHHHHHH-HHHHHHHHC--CCHHHHHHHHHHH
T ss_conf 511--234589462243666464012117648656------77688757899999-999998740--4506889883289
Q ss_pred HHHHHHHHHHCCC-CCCCCCCCCCCE-EEEEEC-----CCCHHHHHHHHHHCCCEEEECHHHCCCCCCCCHHHHHCCCCC
Q ss_conf 3444443210001-223221103652-289857-----999999999987589699871133886433101467628887
Q gi|254781091|r 276 LEQELKKLIPNII-IYGKDAERISNT-CCFSIP-----FLKAEVLQIALDLEGIAVSAGSACSSGKIKKNHVLAAMGFDT 348 (383)
Q Consensus 276 l~~~l~~~~~~~~-i~~~~~~~~~~i-~~~~~~-----~~~~~~v~~~l~~~gI~v~~G~~C~~~~~~~~~vl~~~g~~~ 348 (383)
T Consensus 340 f~~~L~~l~~~S~dvv--~EVRGkGLL~AIe~~~~ka~~~~~w~~Cl~~k~~GLlak~~-----------------n--- 397 (426)
T TIGR01885 340 FLDELKQLARESPDVV--KEVRGKGLLIAIEFKENKADEIGAWDVCLRLKENGLLAKPT-----------------N--- 397 (426)
T ss_pred HHHHHHHHHHHCCCCE--EHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHCCCCEECCC-----------------C---
T ss_conf 9999998875076400--01156721688885065333264668878852074210133-----------------5---
Q ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHHHH
Q ss_conf 47659999078889999999999999999
Q gi|254781091|r 349 SQGAVRVSCGDSTTQEDIDIFLNALQKII 377 (383)
Q Consensus 349 ~~g~vRiS~~~~nT~~dId~l~~~L~~iv 377 (383)
T Consensus 398 hd~~IR~aPPL~i~~E~L~~~ie~i~K~~ 426 (426)
T TIGR01885 398 HDKIIRLAPPLVITKEQLDEVIEIIRKTL 426 (426)
T ss_pred CCCEEEECCCCCCCHHHHHHHHHHHHHCC
T ss_conf 87068717885263899999999986049