HHsearch alignment for GI: 254781091 and conserved domain: TIGR01885

>TIGR01885 Orn_aminotrans ornithine--oxo-acid transaminase; InterPro: IPR010164 Ornithine aminotransferase catalyses the conversion of L-ornithine and a 2-oxo acid to L-glutamate 5-semialdehyde and an L-amino acid. This enzyme is found in low-GC bacteria, where it is responsible for the fourth step in arginine biosynthesis, and in the mitochondrial matrix of eukaryotes, where it controls L-ornithine levels in tissues. In human hereditary ornithine aminotransferase deficiency, the elevated levels of intraocular concentrations of ornithine are responsible for gyrate atrophy, which affects the CNS and peripheral nervous system ; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding.
Probab=99.63  E-value=4.9e-14  Score=104.74  Aligned_cols=330  Identities=18%  Similarity=0.240  Sum_probs=207.3

Q ss_pred             CEECCCCCC-C-----CCCHHHHHHHHHHHHHCCCCCH-HHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEECCHHHHHH
Q ss_conf             001215788-8-----9898999999999964288523-65899999999999999999972989778988668538764
Q gi|254781091|r    4 RVYLDWNAT-A-----PLLEVVRQSFVKSLDFYGNPSS-VHKEGQKTRLYIEESRRIIADFCGAKPDHVVFTSSATEAAN   76 (383)
Q Consensus         4 ~iYlD~aat-t-----p~~~~v~~a~~~~~~~~~n~~s-~h~~~~~~~~~~e~aR~~ia~~~g~~~~ei~ft~~~T~a~~   76 (383)
T Consensus        42 ~~Y~D~LSaYSavNqGHchP~i~~Al~~Q~~KlTL~Sraf~------nd~lg~~~~~~t~LfgGk~~~vL~mNTGaEAvE  115 (426)
T TIGR01885        42 REYLDFLSAYSAVNQGHCHPKIVNALKNQADKLTLTSRAFH------NDVLGEFAKYLTKLFGGKYEKVLPMNTGAEAVE  115 (426)
T ss_pred             CEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHH------CCHHHHHHHHHHHHCCCCCCEEECCCCCHHHHH
T ss_conf             88641002554401376771689999999851371027660------603578999999754995105604568734799


Q ss_pred             HHHHHH-HHHCC--CCCCCC-EEEECCCCCC-CCCCCCC-------------------CCCCCCCCCCCCCCCCCCCHHH
Q ss_conf             455654-42102--245664-5873332122-1112222-------------------2222222222222221110234
Q gi|254781091|r   77 WVLTPH-FYQGS--HKISID-SLYISAIEHP-AVYAGGH-------------------FPSHKIHKIPVLSKGIVDIQAL  132 (383)
Q Consensus        77 ~~i~~~-~~~~~--~~~~~~-~ii~s~~eH~-s~~~~~~-------------------~~~~~v~~v~~~~~g~i~~~~l  132 (383)
T Consensus       116 tA~KLAR~WgY~~K~ip~~kA~ii~~~GNFhGRTlgA~S~Std~e~~k~~FGPflPnvasGhgf~~iPYg-----d~EAl  190 (426)
T TIGR01885       116 TALKLARKWGYEVKGIPRNKAKIIAASGNFHGRTLGAVSASTDSETSKKGFGPFLPNVASGHGFRKIPYG-----DLEAL  190 (426)
T ss_pred             HHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCC-----CHHHH
T ss_conf             9999999744135785576238998538873303544320267212006787967743357852115588-----87899


Q ss_pred             HHHHHHH-HCCCCCCEEEEECCCCCCCCCCC----HHHHHHHHCCCCCCCCCCCCCCC-C----CCCCCCCC--CCCEEE
Q ss_conf             5532443-11356532654034344433321----12356520344653344432336-5----54444433--431068
Q gi|254781091|r  133 TDFLEQR-NSTCGIPMIAVMFVNNETGVIQP----IKEIAQIVKEYQGILVVDAVQAA-G----RIPLSIEE--IKADFL  200 (383)
Q Consensus       133 ~~~i~~~-t~~~~~~LVs~~~~~n~tG~i~p----i~~I~~~~~~~g~~~~vD~aqa~-g----~~~id~~~--~~~D~~  200 (383)
T Consensus       191 ~~aL~~P~~~GDnVAA~i~EPIQGEAGvvvPp~gYl~~V~~LC~~~nVLfI~DEiQTGlGRTGk~la~dh~~aev~PDi~  270 (426)
T TIGR01885       191 RKALQDPKKTGDNVAAFILEPIQGEAGVVVPPPGYLPGVRALCKEHNVLFIADEIQTGLGRTGKLLACDHENAEVKPDIV  270 (426)
T ss_pred             HHHHHCCCCCCCCEEEEEECCCCCCCCEEECCCCHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHCCCCEECCCCE
T ss_conf             99972757788868999950403544368489635789999865518728982000384025453310105882045033


Q ss_pred             EECCCC-CCC-CCCCHHHHCCCCCCCC---CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHH
Q ss_conf             730543-322-3432011014574201---22122477421222222211222100122110010024565321012333
Q gi|254781091|r  201 IISSHK-LGA-PVGAGALVFREDILLP---SPLLRGGDQEKGQRAGTENYAVIGGFAVAAQQMVKDIQKRSSRVFAIRDY  275 (383)
Q Consensus       201 ~~S~hK-~~G-P~G~G~L~~r~~~~~~---~p~~~Gg~~e~~~~~GT~~~~~i~~~~~al~~~~~~~~~~~~~~~~L~~~  275 (383)
T Consensus       271 lLG--KALsGGv~PiSa~la~~dim~vl~PGPF~H------GSTfGGNPLAcava-iAaLeVL~~--ekL~~~A~~lG~~  339 (426)
T TIGR01885       271 LLG--KALSGGVYPISAVLADDDIMSVLKPGPFEH------GSTFGGNPLACAVA-IAALEVLEE--EKLAERADQLGDM  339 (426)
T ss_pred             EEE--HHHCCCCCCEEEEEECCCEEECCCCCCCCC------CCCCCCCHHHHHHH-HHHHHHHHC--CCHHHHHHHHHHH
T ss_conf             511--234589462243666464012117648656------77688757899999-999998740--4506889883289


Q ss_pred             HHHHHHHHHHCCC-CCCCCCCCCCCE-EEEEEC-----CCCHHHHHHHHHHCCCEEEECHHHCCCCCCCCHHHHHCCCCC
Q ss_conf             3444443210001-223221103652-289857-----999999999987589699871133886433101467628887
Q gi|254781091|r  276 LEQELKKLIPNII-IYGKDAERISNT-CCFSIP-----FLKAEVLQIALDLEGIAVSAGSACSSGKIKKNHVLAAMGFDT  348 (383)
Q Consensus       276 l~~~l~~~~~~~~-i~~~~~~~~~~i-~~~~~~-----~~~~~~v~~~l~~~gI~v~~G~~C~~~~~~~~~vl~~~g~~~  348 (383)
T Consensus       340 f~~~L~~l~~~S~dvv--~EVRGkGLL~AIe~~~~ka~~~~~w~~Cl~~k~~GLlak~~-----------------n---  397 (426)
T TIGR01885       340 FLDELKQLARESPDVV--KEVRGKGLLIAIEFKENKADEIGAWDVCLRLKENGLLAKPT-----------------N---  397 (426)
T ss_pred             HHHHHHHHHHHCCCCE--EHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHCCCCEECCC-----------------C---
T ss_conf             9999998875076400--01156721688885065333264668878852074210133-----------------5---


Q ss_pred             CCCEEEEEECCCCCHHHHHHHHHHHHHHH
Q ss_conf             47659999078889999999999999999
Q gi|254781091|r  349 SQGAVRVSCGDSTTQEDIDIFLNALQKII  377 (383)
Q Consensus       349 ~~g~vRiS~~~~nT~~dId~l~~~L~~iv  377 (383)
T Consensus       398 hd~~IR~aPPL~i~~E~L~~~ie~i~K~~  426 (426)
T TIGR01885       398 HDKIIRLAPPLVITKEQLDEVIEIIRKTL  426 (426)
T ss_pred             CCCEEEECCCCCCCHHHHHHHHHHHHHCC
T ss_conf             87068717885263899999999986049