HHsearch alignment for GI: 254781091 and conserved domain: TIGR01977
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein; InterPro: IPR010969 This entry describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulphurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N terminus. The function of members of this family are unknown..
Probab=100.00 E-value=0 Score=573.65 Aligned_cols=355 Identities=29% Similarity=0.444 Sum_probs=321.5
Q ss_pred EECCCCCCC-CCCHHHHHHHHHHHHHCC-CCC-HHHHHHHHHHHHHHHHHHHHHHHCCCCH-HHEEEECCHHHHHHHHHH
Q ss_conf 012157888-989899999999996428-852-3658999999999999999999729897-789886685387644556
Q gi|254781091|r 5 VYLDWNATA-PLLEVVRQSFVKSLDFYG-NPS-SVHKEGQKTRLYIEESRRIIADFCGAKP-DHVVFTSSATEAANWVLT 80 (383)
Q Consensus 5 iYlD~aatt-p~~~~v~~a~~~~~~~~~-n~~-s~h~~~~~~~~~~e~aR~~ia~~~g~~~-~ei~ft~~~T~a~~~~i~ 80 (383)
T Consensus 1 iYfDnAATtyPKP~ev~~a~~~~~~~~gg~~gRG~~~~~l~~~~~v~EtR~~lA~Lf~~~~~~~v~Ft~nAT~aLN~~L~ 80 (384)
T TIGR01977 1 IYFDNAATTYPKPDEVYEAMADFLKNYGGSPGRGRYRLALRASREVEETRELLAKLFNAPSKAHVVFTNNATTALNIALK 80 (384)
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHH
T ss_conf 97676656899738999999999873487568887503454142288999999998488974627840607799999984
Q ss_pred H-HHHHCCCCCCCCEEEECCCCCCCCCCCCCCC-----CCCCCCCCCCCCCCCCCHHHHHHHHHH-HCCCCCCEEEEECC
Q ss_conf 5-4421022456645873332122111222222-----222222222222211102345532443-11356532654034
Q gi|254781091|r 81 P-HFYQGSHKISIDSLYISAIEHPAVYAGGHFP-----SHKIHKIPVLSKGIVDIQALTDFLEQR-NSTCGIPMIAVMFV 153 (383)
Q Consensus 81 ~-~~~~~~~~~~~~~ii~s~~eH~s~~~~~~~~-----~~~v~~v~~~~~g~i~~~~l~~~i~~~-t~~~~~~LVs~~~~ 153 (383)
T Consensus 81 Gl~lkn----r~g~hVi~t~mEHNsV~RPL~~L~~~~~g~~~~iv~~~~~G~~~~e~i~~~~~~~kTk-----~iv~~Ha 151 (384)
T TIGR01977 81 GLILKN----REGDHVITTPMEHNSVLRPLEKLKEERIGVEITIVKCDNEGLISPERIKRAIKKNKTK-----LIVVSHA 151 (384)
T ss_pred CCCCCC----CCCCCEEECCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHCCCCCCC-----EEEEECH
T ss_conf 330005----5999678647602366438999973599758998627888521679999853378830-----0432200
Q ss_pred CCCCCCCCCHHHHH-HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCC-CCCCCCCHHHHCCCCCC-CCCCCCC
Q ss_conf 34443332112356-520344653344432336554444433431068730543-32234320110145742-0122122
Q gi|254781091|r 154 NNETGVIQPIKEIA-QIVKEYQGILVVDAVQAAGRIPLSIEEIKADFLIISSHK-LGAPVGAGALVFREDIL-LPSPLLR 230 (383)
Q Consensus 154 ~n~tG~i~pi~~I~-~~~~~~g~~~~vD~aqa~g~~~id~~~~~~D~~~~S~hK-~~GP~G~G~L~~r~~~~-~~~p~~~ 230 (383)
T Consensus 152 SNV~G~ilpiEEIgR~lA~e~g~~~~~DAaQtAGv~~Id~~~~~i~~lAF~GHKgLlGP~GtGGl~~~e~~~~~l~pl~~ 231 (384)
T TIGR01977 152 SNVTGTILPIEEIGRELAKENGIFFILDAAQTAGVIPIDMEELAIDMLAFTGHKGLLGPQGTGGLIIKEGIKEILKPLKS 231 (384)
T ss_pred HHHCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCHHCCCHHHCCEEEECCCHHHHCCCCCEEEEEECCHHHHHHHHCC
T ss_conf 30103112578999999986797399832000375410103220676763775220011363157887370567453206
Q ss_pred CCC------------CCCCCCCCCCCCCCCCCHHHHHHCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC-CCCC
Q ss_conf 477------------421222222211222100122110010-02456532101233334444432100012232-2110
Q gi|254781091|r 231 GGD------------QEKGQRAGTENYAVIGGFAVAAQQMVK-DIQKRSSRVFAIRDYLEQELKKLIPNIIIYGK-DAER 296 (383)
Q Consensus 231 Gg~------------~e~~~~~GT~~~~~i~~~~~al~~~~~-~~~~~~~~~~~L~~~l~~~l~~~~~~~~i~~~-~~~~ 296 (383)
T Consensus 232 GGTGs~S~~~~~P~~~PdrfE~GTLN~pGI~gL~agik~~~~~gi~~i~~kE~~l~~~l~~~L~~-~~~V~iyG~~d~~~ 310 (384)
T TIGR01977 232 GGTGSHSALIDQPSELPDRFESGTLNTPGIAGLNAGIKFIEKIGIANIAKKELKLTEKLLNGLKE-IKKVKIYGPKDPAK 310 (384)
T ss_pred CCCCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-CCCEEEECCCCHHH
T ss_conf 88754534445776043201144003799999988878875644778999999999999874016-78067627703433
Q ss_pred CCCEEEEEECCCCHHHHHHHHHHC-CCEEEECHHHCCCCCCCCHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 365228985799999999998758-9699871133886433101467628887476599990788899999999999999
Q gi|254781091|r 297 ISNTCCFSIPFLKAEVLQIALDLE-GIAVSAGSACSSGKIKKNHVLAAMGFDTSQGAVRVSCGDSTTQEDIDIFLNALQK 375 (383)
Q Consensus 297 ~~~i~~~~~~~~~~~~v~~~l~~~-gI~v~~G~~C~~~~~~~~~vl~~~g~~~~~g~vRiS~~~~nT~~dId~l~~~L~~ 375 (383)
T Consensus 311 ~~~vvSf~~~g~d~~~va~~L~~~~~I~~RtGlHCAPLAH~~------~GT-~~~Gt~R~S~gyFnt~ee~~~l~~al~~ 383 (384)
T TIGR01977 311 RVGVVSFTVEGIDSEEVADILDEKFDIAVRTGLHCAPLAHKT------IGT-FATGTIRLSLGYFNTEEEIEKLVEALSE 383 (384)
T ss_pred CCCEEEEEECCCCHHHHHHHHHHCCCCEEECCCCCCHHHHHH------HCC-CCCCEEEEECCCCCCHHHHHHHHHHHHC
T ss_conf 267589983488877899999861891897676664123035------311-6765388727877888999999999850
Q ss_pred H
Q ss_conf 9
Q gi|254781091|r 376 I 376 (383)
Q Consensus 376 i 376 (383)
T Consensus 384 i 384 (384)
T TIGR01977 384 I 384 (384)
T ss_pred C
T ss_conf 9