>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).

Probab=99.72 E-value=6.2e-16 Score=116.24 Aligned_cols=327 Identities=18% Similarity=0.171 Sum_probs=171.1 Q ss_pred CCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH-C--CCCHHHEEEECCHHHHHHHHHHHHHHHCCCCC Q ss_conf 98989999999999642885236589999999999999999997-2--98977898866853876445565442102245 Q gi|254781091|r 14 PLLEVVRQSFVKSLDFYGNPSSVHKEGQKTRLYIEESRRIIADF-C--GAKPDHVVFTSSATEAANWVLTPHFYQGSHKI 90 (383) Q Consensus 14 p~~~~v~~a~~~~~~~~~n~~s~h~~~~~~~~~~e~aR~~ia~~-~--g~~~~ei~ft~~~T~a~~~~i~~~~~~~~~~~ 90 (383) T Consensus 46 ~~P~~i~~a~~~ai~~~~~~~~~~gY~--~~~G~~~LReaia~~~~~~~~~~d~I~vt~Ga~~~l~~-l~a~l------~ 116 (402) T TIGR03542 46 PLPASVIEAFHEAVDELASEETYRGYG--PEQGLPALREAIAENDYRGRISPEEIFISDGAKCDIGR-LQSIF------G 116 (402) T ss_pred CCCHHHHHHHHHHHHHCCCCCCCCCCC--CCCCHHHHHHHHHHHHHCCCCCHHHEEECCCCHHHHHH-HHHHH------C T ss_conf 989999999999997122467867779--74064999999999975689988996777782999999-99983------9 Q ss_pred CCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-C-----HHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCC-- Q ss_conf 66458733321221112222222222222222222111-0-----234553244311356532654034344433321-- Q gi|254781091|r 91 SIDSLYISAIEHPAVYAGGHFPSHKIHKIPVLSKGIVD-I-----QALTDFLEQRNSTCGIPMIAVMFVNNETGVIQP-- 162 (383) Q Consensus 91 ~~~~ii~s~~eH~s~~~~~~~~~~~v~~v~~~~~g~i~-~-----~~l~~~i~~~t~~~~~~LVs~~~~~n~tG~i~p-- 162 (383) T Consensus 117 pGD~Vii~~P~y~~Y~~~~~~~g~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~---~ktk~iiln~P~NPTG~v~s~e 193 (402) T TIGR03542 117 SDNTVAVQDPVYPAYVDTAVMTGRAGFADDTGQYRGIVYLPCTKENGFIPELPEE---RKIDIIYLCSPNNPTGTVLTKE 193 (402) T ss_pred CCCEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCEEECCCCHHHCCCCCCCCC---CCCEEEEECCCCCCCCCCCCHH T ss_conf 9998998388881579999985995301356655672567676243857222345---5735999899979887568999 Q ss_pred -HHHHHHHHCCCCCCCCCCCCCCC----CCCCCCC---CCC-CCEEEEECCCCCCCCCC--CHHHHCCCCCCCCC--CCC Q ss_conf -12356520344653344432336----5544444---334-31068730543322343--20110145742012--212 Q gi|254781091|r 163 -IKEIAQIVKEYQGILVVDAVQAA----GRIPLSI---EEI-KADFLIISSHKLGAPVG--AGALVFREDILLPS--PLL 229 (383) Q Consensus 163 -i~~I~~~~~~~g~~~~vD~aqa~----g~~~id~---~~~-~~D~~~~S~hK~~GP~G--~G~L~~r~~~~~~~--p~~ 229 (383) T Consensus 194 el~~i~~la~~~~i~iIsDEiY~~~~~~~~~~~s~~~~~~~~~~~I~i~S~SK~~~m~G~RiG~~i~p~~l~~~~~~~~~ 273 (402) T TIGR03542 194 QLKELVDYANAHGSLILFDAAYSAFISDPSIPHSIYEIEGAKECAIEINSFSKSLGFTGVRLGWTVVPKELTYADGHSVI 273 (402) T ss_pred HHHHHHHHHHHCCEEEEECCCHHHHHCCCCCCCCCEECCCCCCEEEECCCCCCCCCCCCCCHHHEECCHHHHHHHHHHHH T ss_conf 99999999875070796022288761689876201113665213673167624027834054021125877542279999 Q ss_pred CCCCCCCCCCCC---CCCCCCCCCHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEE Q ss_conf 247742122222---2211222100122110-010024565321012333344444321000122322110365228985 Q gi|254781091|r 230 RGGDQEKGQRAG---TENYAVIGGFAVAAQQ-MVKDIQKRSSRVFAIRDYLEQELKKLIPNIIIYGKDAERISNTCCFSI 305 (383) Q Consensus 230 ~Gg~~e~~~~~G---T~~~~~i~~~~~al~~-~~~~~~~~~~~~~~L~~~l~~~l~~~~~~~~i~~~~~~~~~~i~~~~~ 305 (383) T Consensus 274 ~~---~~~~~~~~~~~~~~~~q~a~~aal~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~g~~~~~~~ga---~yl~~~~ 345 (402) T TIGR03542 274 QD---WERRLCTTFNGASYPVQRAAEAAYAGEGLQPILEAISYYMENARILREALEA--AGFKVYGGENA---PYLWVKT 345 (402) T ss_pred HH---HHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH--CCCEEECCCCC---EEEEEEC T ss_conf 99---9999876257755999999999973788599999999999999999998875--69576079973---4897878 Q ss_pred C-CCCHHHHHH-HHHHCCCEEEECHHHCCCCCCCCHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHH Q ss_conf 7-999999999-98758969987113388643310146762888747659999078889999999999999999 Q gi|254781091|r 306 P-FLKAEVLQI-ALDLEGIAVSAGSACSSGKIKKNHVLAAMGFDTSQGAVRVSCGDSTTQEDIDIFLNALQKII 377 (383) Q Consensus 306 ~-~~~~~~v~~-~l~~~gI~v~~G~~C~~~~~~~~~vl~~~g~~~~~g~vRiS~~~~nT~~dId~l~~~L~~iv 377 (383) T Consensus 346 ~~~~~~~~~~~~ll~e~~V~vvPG~~F--------------G~-~g~g~vRls~a--~~~e~l~ea~~Rl~~~L 402 (402) T TIGR03542 346 PEGISSWDFFDFLLYQYHIVGTPGSGF--------------GS-SGEGFVRFSAF--GKRENIVAACERIKHAL 402 (402) T ss_pred CCCCCHHHHHHHHHHHCCEEEECCHHH--------------CC-CCCCEEEEEEE--CCHHHHHHHHHHHHHHC T ss_conf 999898999999998599999764476--------------89-99896999972--99999999999999759

HHsearch alignment for GI: 254781091 and conserved domain: TIGR03542