HHsearch alignment for GI: 254781091 and conserved domain: pfam01276

>pfam01276 OKR_DC_1 Orn/Lys/Arg decarboxylase, major domain.
Probab=99.83  E-value=9.7e-20  Score=139.30  Aligned_cols=268  Identities=16%  Similarity=0.127  Sum_probs=182.8

Q ss_pred             HHHHHHHHHHHHHCCCCHHHEEEECCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCC--
Q ss_conf             999999999999729897789886685387644556544210224566458733321221112222222222222222--
Q gi|254781091|r   45 LYIEESRRIIADFCGAKPDHVVFTSSATEAANWVLTPHFYQGSHKISIDSLYISAIEHPAVYAGGHFPSHKIHKIPVL--  122 (383)
Q Consensus        45 ~~~e~aR~~ia~~~g~~~~ei~ft~~~T~a~~~~i~~~~~~~~~~~~~~~ii~s~~eH~s~~~~~~~~~~~v~~v~~~--  122 (383)
T Consensus        66 g~I~eAq~~aA~~fga~~t-~flvnGsT~g~~a~i~a~~------~~Gd~Vlv~RN~HkSv~~al~l~g~~Pvyl~p~~~  138 (417)
T pfam01276        66 GPIKEAQKYAARVFGADKS-YFVVNGTSGANKTVGMAVC------TPGDTVLIDRNCHKSIHHALMMSGATPVYLEPTRN  138 (417)
T ss_pred             HHHHHHHHHHHHHHCCCCE-EEEECCCCHHHHHHHHHHC------CCCCEEEEECCCHHHHHHHHHHCCCEEEEECCCCC
T ss_conf             3999999999998399936-9984683099999999743------89998997164189999999986985899536424


Q ss_pred             CCCC--------CCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCC--CCC--C
Q ss_conf             2221--------110234553244311356532654034344433321123565203446533444323365--544--4
Q gi|254781091|r  123 SKGI--------VDIQALTDFLEQRNSTCGIPMIAVMFVNNETGVIQPIKEIAQIVKEYQGILVVDAVQAAG--RIP--L  190 (383)
Q Consensus       123 ~~g~--------i~~~~l~~~i~~~t~~~~~~LVs~~~~~n~tG~i~pi~~I~~~~~~~g~~~~vD~aqa~g--~~~--i  190 (383)
T Consensus       139 ~~gi~~~i~~~~~~~e~~~~~l~~~p~~k~~~~v~lt~PtY-~G~~~di~~i~~~~h~~~~~llvDEAhGah~~F~plp~  217 (417)
T pfam01276       139 AYGIIGGIPLHEFQEETIKEALAEVPPAKGPRLAVITNGTY-DGTIYNAKEIVDTLGHLSDYILFDSAWVGYEQFIPIYA  217 (417)
T ss_pred             CCCCCCCCCHHHCCHHHHHHHHHHCCCCCCCEEEEEECCCC-CEEEECHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCH
T ss_conf             34661588825459999999998587656850899989998-70652899999998633987999788752024687833


Q ss_pred             CCCCCCCE-------EEEECCCC-CCCCCCCHHHHCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCC-C
Q ss_conf             44334310-------68730543-3223432011014574-2012212247742122222221122210012211001-0
Q gi|254781091|r  191 SIEEIKAD-------FLIISSHK-LGAPVGAGALVFREDI-LLPSPLLRGGDQEKGQRAGTENYAVIGGFAVAAQQMV-K  260 (383)
Q Consensus       191 d~~~~~~D-------~~~~S~hK-~~GP~G~G~L~~r~~~-~~~~p~~~Gg~~e~~~~~GT~~~~~i~~~~~al~~~~-~  260 (383)
T Consensus       218 ~a~~~gad~~~~~~~~vvqS~HKtL~altQ~s~Lh~~~~~~~~~~~~~~---~l~~~qTTSPsY~lmASLD~ar~~m~~~  294 (417)
T pfam01276       218 DASPMGGDNVNDPGIIVTQSVHKLLAAFSQASQIHKKDSHIVNHKRFNE---AFMMHTSTSPFYPIVASLDVAAAMMEGN  294 (417)
T ss_pred             HHHHCCCCCCCCCCEEEEEEHHHCCCCCCHHHHHHHCCCCCCCHHHHHH---HHHHHCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf             4665678866677227986111135430434321216787789999999---9997738874899999999999997535


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHCC---CCCCCCC------------C--------------CCCCEEEEEEC-----
Q ss_conf             024565321012333344444321000---1223221------------1--------------03652289857-----
Q gi|254781091|r  261 DIQKRSSRVFAIRDYLEQELKKLIPNI---IIYGKDA------------E--------------RISNTCCFSIP-----  306 (383)
Q Consensus       261 ~~~~~~~~~~~L~~~l~~~l~~~~~~~---~i~~~~~------------~--------------~~~~i~~~~~~-----  306 (383)
T Consensus       295 ~G~~l~~~~i~~a~~~R~~i~~l-~~~~~~~~~~~~~i~~~~~~~~~~~~~~hg~~~~~~~~~~lDptKltI~t~g~~~~  373 (417)
T pfam01276       295 SGRRLWQESLERAIEFRKEIKTL-NDGEFFRPWNPEIVDGKECWPFHPGEKWHGFEGYDDNQYFLDPIKLTILTPGIDET  373 (417)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHC-CCCCEEECCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCC
T ss_conf             54999999999999999999864-57852203671004771010247653213555555554257785699980786877


Q ss_pred             ------CCCHHHHHHHHHHCCCEE
Q ss_conf             ------999999999987589699
Q gi|254781091|r  307 ------FLKAEVLQIALDLEGIAV  324 (383)
Q Consensus       307 ------~~~~~~v~~~l~~~gI~v  324 (383)
T Consensus       374 g~~~~~GisG~~v~~~Lre~gI~~  397 (417)
T pfam01276       374 GEYEEFGVPATIVAKYLREHGIVP  397 (417)
T ss_pred             CCHHHCCCCHHHHHHHHHHCCCEE
T ss_conf             633323977999999999869889