HHsearch alignment for GI: 254781091 and conserved domain: pfam02347
>pfam02347 GDC-P Glycine cleavage system P-protein. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is:- Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2
Probab=99.22 E-value=3.1e-10 Score=81.75 Aligned_cols=278 Identities=22% Similarity=0.269 Sum_probs=156.6
Q ss_pred HHHHHHHCCCCHHHEEEECCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCC----CCCCCCCCCCCCCCC
Q ss_conf 9999997298977898866853876445565442102245664587333212211122222----222222222222221
Q gi|254781091|r 51 RRIIADFCGAKPDHVVFTSSATEAANWVLTPHFYQGSHKISIDSLYISAIEHPAVYAGGHF----PSHKIHKIPVLSKGI 126 (383)
Q Consensus 51 R~~ia~~~g~~~~ei~ft~~~T~a~~~~i~~~~~~~~~~~~~~~ii~s~~eH~s~~~~~~~----~~~~v~~v~~~~~g~ 126 (383)
T Consensus 116 Qtmi~eLTGmdvaNASlyD~aTA~aEA~~ma~r~---~k~~~~~vlv~~~~hP~~~~Vl~T~~~~~~i~i~~~~~~~~~~ 192 (429)
T pfam02347 116 QTMVCDLTGLDVANASLLDEGTAAAEAMALAARI---SKGKKKKFVVDKDCHPQTLDVLRTRAKGFGIEIVEVDLTEEGF 192 (429)
T ss_pred HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH---HCCCCCEEEEECCCCHHHHHHHHHHHHCCCCEEEEECCCCCCC
T ss_conf 9999998588756876666788999999998765---1578877998288783189999975422795799967200145
Q ss_pred CCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCC--CCCCCCCCCCCCCCEEEEECC
Q ss_conf 110234553244311356532654034344433321123565203446533444323--365544444334310687305
Q gi|254781091|r 127 VDIQALTDFLEQRNSTCGIPMIAVMFVNNETGVIQPIKEIAQIVKEYQGILVVDAVQ--AAGRIPLSIEEIKADFLIISS 204 (383)
Q Consensus 127 i~~~~l~~~i~~~t~~~~~~LVs~~~~~n~tG~i~pi~~I~~~~~~~g~~~~vD~aq--a~g~~~id~~~~~~D~~~~S~ 204 (383)
T Consensus 193 ~~--------~~~~-----a~v~~q~Pn-~~G~ied~~~i~~~~h~~gal~iv-~~dplsL~ll~-~Pg~~GaDI~vG~~ 256 (429)
T pfam02347 193 SD--------EGDV-----FGVLVQYPN-TEGRIEDYKELIEIAHQHGSLVVV-AADLLALTILK-PPGEFGADIVVGSA 256 (429)
T ss_pred CC--------CCCE-----EEEEEECCC-CCCCEECCHHHHHHHHHCCCEEEE-EECHHHHCCCC-CCCCCCCCEEEECC
T ss_conf 55--------5476-----899993799-983172349999998645966999-80779960768-97656633797257
Q ss_pred CCC------CCCCCCHHHHCCCCCCCCCCC-CCCC-----------------CCCCCCCCCCCCCCCCC---CHHHHHH-
Q ss_conf 433------223432011014574201221-2247-----------------74212222222112221---0012211-
Q gi|254781091|r 205 HKL------GAPVGAGALVFREDILLPSPL-LRGG-----------------DQEKGQRAGTENYAVIG---GFAVAAQ- 256 (383)
Q Consensus 205 hK~------~GP~G~G~L~~r~~~~~~~p~-~~Gg-----------------~~e~~~~~GT~~~~~i~---~~~~al~- 256 (383)
T Consensus 257 Q~lGipm~fGGP~-~gf~a~~~~~~R~~PGRivG~t~D~~G~~~~~ltLqtREQHIrReKAtSNICTnqaL~A~~a~~Y~ 335 (429)
T pfam02347 257 QRFGVPMGYGGPH-AGFFAVKEELKRKMPGRIVGVSKDANGKRALRLALQTREQHIRRDKATSNICTAQALLANMAAMYA 335 (429)
T ss_pred CCCCCCCCCCCCC-CCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 6578887889882-001544888997499764467758899873365412434303344420346500899999999999
Q ss_pred --CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCEEEECHHHCCCC
Q ss_conf --001002456532101233334444432100012232211036522898579999999999875896998711338864
Q gi|254781091|r 257 --QMVKDIQKRSSRVFAIRDYLEQELKKLIPNIIIYGKDAERISNTCCFSIPFLKAEVLQIALDLEGIAVSAGSACSSGK 334 (383)
Q Consensus 257 --~~~~~~~~~~~~~~~L~~~l~~~l~~~~~~~~i~~~~~~~~~~i~~~~~~~~~~~~v~~~l~~~gI~v~~G~~C~~~~ 334 (383)
T Consensus 336 ~~~Gp~GL~~iA~~~~~~A~yl~~~L~~~-~g~~~~~~~F---fd~v~~~~~~~~~~~l~~~~i~~G~~l~--------- 402 (429)
T pfam02347 336 VYHGPKGLKEIARRIHSLTLYLAKGLKKL-AGHELDHDHF---FDTLKITVEDRAAEELLKRAEKGGINLR--------- 402 (429)
T ss_pred HHHCHHHHHHHHHHHHHHHHHHHHHHHHC-CCEECCCCCC---CCEEEEECCCHHHHHHHHHHHHCCCCEE---------
T ss_conf 98697889999999999999999999866-9976679996---2159996282789999999997799736---------
Q ss_pred CCCCHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHH
Q ss_conf 331014676288874765999907888999999999999
Q gi|254781091|r 335 IKKNHVLAAMGFDTSQGAVRVSCGDSTTQEDIDIFLNAL 373 (383)
Q Consensus 335 ~~~~~vl~~~g~~~~~g~vRiS~~~~nT~~dId~l~~~L 373 (383)
T Consensus 403 -----------~-~~~~~~li~vtE~~T~edId~Lv~~f 429 (429)
T pfam02347 403 -----------Y-VDLGTVGIALDETTTKEDVDALLKVF 429 (429)
T ss_pred -----------E-CCCCEEEEEECCCCCHHHHHHHHHHC
T ss_conf -----------5-38994999964799999999999759