RPSBLAST alignment for GI: 254781091 and conserved domain: TIGR01976
>gnl|CDD|162635 TIGR01976, am_tr_V_VC1184, cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase. Length = 397
Score = 93.7 bits (233), Expect = 8e-20
Identities = 90/398 (22%), Positives = 151/398 (37%), Gaps = 46/398 (11%)
Query: 4 RVYLDWNATAPLLEVVRQSFVKSLDFYG-NPSSVHKEGQKTRLYIEESRRIIADFCGAKP 62
RV+ D A + + V + +L N ++ ++ ++++R +AD A P
Sbjct: 18 RVFFDNPAGTQIPQSVADAVSAALTRSNANRGGAYESSRRADQVVDDAREAVADLLNADP 77
Query: 63 DHVVFTSSATEAANWVLTPHFYQGSHKISI--DSLYISAIEHPAVYA----GGHFPSHKI 116
VVF ++AT LT + + D + ++ ++H A + K+
Sbjct: 78 PEVVFGANAT-----SLTFLLSRAISRRWGPGDEVIVTRLDHEANISPWLQAAERAGAKV 132
Query: 117 HKIPVLSK-GIVDIQALTDFLEQRNSTCGIPMIAVMFVNNETGVIQPIKEIAQIVKEYQG 175
V G + L L R ++AV +N G I + I ++V
Sbjct: 133 KWARVDEATGELHPDDLASLLSPRTR-----LVAVTAASNTLGSIVDLAAITELVHAAGA 187
Query: 176 ILVVDAVQAAGRIPLSIEEIKADFLIISSHKLGAPVGAGALVFREDI---LLPSPLLRGG 232
++VVDAV A + ++ ADFL S++K P G L R ++ L P L
Sbjct: 188 LVVVDAVHYAPHGLIDVQATGADFLTCSAYKFFGP-HMGILWGRPELLMNLPPYKLTFSY 246
Query: 233 DQEKGQ-RAGTENYAVIGGFAVAAQQM----VKDIQKRSSRVFA-----------IRDYL 276
D + GT Y ++ G A + R R+ A + +YL
Sbjct: 247 DTGPERFELGTPQYELLAGVVAAVDYLAGLGESANGSRRERLVASFQAIDAYENRLAEYL 306
Query: 277 EQELKKLIPNIIIYG-KDAERISNTCCFSIPFLKAEVLQIALDLEGIAVSAGSACSSGKI 335
L L P + +YG T F++ L + + L +GI AG +
Sbjct: 307 LVGLSDL-PGVTLYGVARLAARVPTVSFTVHGLPPQRVVRRLADQGIDAWAGHFYAVR-- 363
Query: 336 KKNHVLAAMGFDTSQGAVRVSCGDSTTQEDIDIFLNAL 373
+L +G + G VRV T E++D L AL
Sbjct: 364 ----LLRRLGLNDEGGVVRVGLAHYNTAEEVDRLLEAL 397