HHsearch alignment for GI: 254781093 and conserved domain: KOG1838
>KOG1838 consensus.
Probab=99.69 E-value=7.4e-15 Score=109.45 Aligned_cols=201 Identities=19% Similarity=0.309 Sum_probs=132.6
Q ss_pred EEECCCCCE-EEE-EEECCCC------CCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCC
Q ss_conf 896589961-879-9966888------77879999578998888998999999999999739849998531558876778
Q gi|254781093|r 4 VVFNGPSGR-LEG-RYQPSTN------PNAPIALILHPHPRFGGTMNDNIVYQLFYLFQQRGFVSLRFNFRGIGRSEGEF 75 (225)
Q Consensus 4 v~i~g~~G~-l~~-~~~~~~~------~~~~~vv~~Hp~p~~GG~~~~~~~~~la~~l~~~G~~vl~fd~RG~G~S~G~~ 75 (225)
T Consensus 96 eii~~~DGG~~~lDW~~~~~~~~~~~~~~~P~vvilpGlt--g~S~-~~YVr~lv~~a~~~G~r~VVfN~RG~~g~~LtT 172 (409)
T KOG1838 96 EIIKTSDGGTVTLDWVENPDSRCRTDDGTDPIVVILPGLT--GGSH-ESYVRHLVHEAQRKGYRVVVFNHRGLGGSKLTT 172 (409)
T ss_pred EEEEECCCCEEEEEECCCCCCCCCCCCCCCCEEEEECCCC--CCCH-HHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCC
T ss_conf 8999279988988622475323577789975799946888--9871-379999999998679679998788778874678
Q ss_pred CC--CCHHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHCCC---CHHEEEECCCCCCCC-------------
Q ss_conf 52--102389999989999862354674058887203687876450386---213301227574433-------------
Q gi|254781093|r 76 DY--GDGELSDAAAALDWVQSLNPESKSCWIAGYSFGAWISMQLLMRRP---EINGFISVAPQPKSY------------- 137 (225)
Q Consensus 76 ~~--g~~E~~D~~aa~~~l~~~~~~~~~i~l~G~S~Gg~val~~a~~~p---~i~~~v~isp~~~~~------------- 137 (225)
T Consensus 173 pr~f~ag~t~Dl~~~v~~i~~~~P~a-~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd~~~~~~~~~~~~~~~ 251 (409)
T KOG1838 173 PRLFTAGWTEDLREVVNHIKKRYPQA-PLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWDLLAASRSIETPLYRR 251 (409)
T ss_pred CCEEECCCHHHHHHHHHHHHHHCCCC-CEEEEEECCHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHCCCCHH
T ss_conf 76650478789999999999748998-44899854409999998664167788405789725404566666775152067
Q ss_pred --------------------------C------------C------------------------CCCCCCCCCEEEEECC
Q ss_conf --------------------------3------------2------------------------2234334773776168
Q gi|254781093|r 138 --------------------------D------------F------------------------SFLAPCPSSGLIINGS 155 (225)
Q Consensus 138 --------------------------~------------~------------------------~~l~~~~~p~LiIhG~ 155 (225)
T Consensus 252 ~y~~~l~~~l~~~~~~~r~~~~~~~vd~d~~~~~~SvreFD~~~t~~~~gf~~~deYY~~aSs~~~v~~I~VP~L~ina~ 331 (409)
T KOG1838 252 FYNRALTLNLKRIVLRHRHTLFEDPVDFDVILKSRSVREFDEALTRPMFGFKSVDEYYKKASSSNYVDKIKVPLLCINAA 331 (409)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHCCCCCCCEEEEECC
T ss_conf 88999987678887631366650511333103018398887655324268886899986055354345542457998568
Q ss_pred CCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCC--CCCCC---HHH-HHHHHHHHHHHHCC
Q ss_conf 65502899999999998607799607999787984--75585---899-99999999997312
Q gi|254781093|r 156 NDTVATTSDVKDLVNKLMNQKGISITHKVIPDANH--FFIGK---VDE-LINECAHYLDNSLD 212 (225)
Q Consensus 156 ~D~~vp~~~~~~~~~~l~~~~~~~~~~~~i~ga~H--~f~~~---~~~-l~~~i~~fl~~~L~ 212 (225)
T Consensus 332 DDPv~p~~~i-p~-~~~~~--np~v~l~~T~~GGHlgfleg~~p~~~~w~~~~l~ef~~~~~~ 390 (409)
T KOG1838 332 DDPVVPEEAI-PI-DDIKS--NPNVLLVITSHGGHLGFLEGLWPSARTWMDKLLVEFLGNAIF 390 (409)
T ss_pred CCCCCCCCCC-CH-HHHHC--CCCEEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 8997880328-98-99844--995899995798646651267876542599999999998874