HHsearch alignment for GI: 254781093 and conserved domain: KOG4409
>KOG4409 consensus.
Probab=99.51 E-value=1.9e-12 Score=94.98 Aligned_cols=178 Identities=17% Similarity=0.313 Sum_probs=116.1
Q ss_pred CCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCC-CCCC--CCHHHHHHHHHHHHHHHHCC
Q ss_conf 88778799995789988889989999999999997398499985315588767-7852--10238999998999986235
Q gi|254781093|r 21 TNPNAPIALILHPHPRFGGTMNDNIVYQLFYLFQQRGFVSLRFNFRGIGRSEG-EFDY--GDGELSDAAAALDWVQSLNP 97 (225)
Q Consensus 21 ~~~~~~~vv~~Hp~p~~GG~~~~~~~~~la~~l~~~G~~vl~fd~RG~G~S~G-~~~~--g~~E~~D~~aa~~~l~~~~~ 97 (225)
T Consensus 86 ~~~~~~plVliH---GyGAg~g--~f~~Nf~~La~-~~~vyaiDllG~G~SSRP~F~~d~~~~e~~fvesiE~WR~~~~L 159 (365)
T KOG4409 86 ESANKTPLVLIH---GYGAGLG--LFFRNFDDLAK-IRNVYAIDLLGFGRSSRPKFSIDPTTAEKEFVESIEQWRKKMGL 159 (365)
T ss_pred CCCCCCCEEEEE---CCCHHHH--HHHHHHHHHHH-CCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
T ss_conf 656787579971---5531678--99986666652-38237862667887779988878651119999999999997698
Q ss_pred CCCCEEEEEECHHHHHHHHHHHCCCC-HHEEEECCCCCCCC----C----------------------------------
Q ss_conf 46740588872036878764503862-13301227574433----3----------------------------------
Q gi|254781093|r 98 ESKSCWIAGYSFGAWISMQLLMRRPE-INGFISVAPQPKSY----D---------------------------------- 138 (225)
Q Consensus 98 ~~~~i~l~G~S~Gg~val~~a~~~p~-i~~~v~isp~~~~~----~---------------------------------- 138 (225)
T Consensus 160 --~KmilvGHSfGGYLaa~YAlKyPerV~kLiLvsP~Gf~~~~~~~~~~~~~~~~w~~~~~~~~~~~nPl~~LR~~Gp~G 237 (365)
T KOG4409 160 --EKMILVGHSFGGYLAAKYALKYPERVEKLILVSPWGFPEKPDSEPEFTKPPPEWYKALFLVATNFNPLALLRLMGPLG 237 (365)
T ss_pred --CCEEEEECCCHHHHHHHHHHHCHHHHCEEEEECCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCC
T ss_conf --200676315027999999986857543379866656656777645315897288865356660677789998605402
Q ss_pred --------------C------CCC--------------------------------------CCCCCCEEEEECCCCCCC
Q ss_conf --------------2------223--------------------------------------433477377616865502
Q gi|254781093|r 139 --------------F------SFL--------------------------------------APCPSSGLIINGSNDTVA 160 (225)
Q Consensus 139 --------------~------~~l--------------------------------------~~~~~p~LiIhG~~D~~v 160 (225)
T Consensus 238 p~Lv~~~~~d~~~k~~~~~~ed~l~~YiY~~n~~~psgE~~fk~l~~~~g~Ar~Pm~~r~~~l~~~~pv~fiyG~~dWmD 317 (365)
T KOG4409 238 PKLVSRLRPDRFRKFPSLIEEDFLHEYIYHCNAQNPSGETAFKNLFEPGGWARRPMIQRLRELKKDVPVTFIYGDRDWMD 317 (365)
T ss_pred HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCC
T ss_conf 67786550889974644221678999999854889827899999875262234069999986266897799944841002
Q ss_pred CHHHHHHHHHHHHHCCCCCEEEEEECCCCCC-CCCCHHHHHHHHHHHHHHH
Q ss_conf 8999999999986077996079997879847-5585899999999999973
Q gi|254781093|r 161 TTSDVKDLVNKLMNQKGISITHKVIPDANHF-FIGKVDELINECAHYLDNS 210 (225)
Q Consensus 161 p~~~~~~~~~~l~~~~~~~~~~~~i~ga~H~-f~~~~~~l~~~i~~fl~~~ 210 (225)
T Consensus 318 ~-~~g~~~~~~~---~~~~~~~~~v~~aGHhvylDnp~~Fn~~v~~~~~~~ 364 (365)
T KOG4409 318 K-NAGLEVTKSL---MKEYVEIIIVPGAGHHVYLDNPEFFNQIVLEECDKV 364 (365)
T ss_pred C-HHHHHHHHHH---HCCCCEEEEECCCCCEEECCCHHHHHHHHHHHHHCC
T ss_conf 3-3579899776---205550799569973365479899999999987525