HHsearch alignment for GI: 254781093 and conserved domain: PRK04940

Probab=97.23  E-value=0.017  Score=34.98  Aligned_cols=115  Identities=15%  Similarity=0.185  Sum_probs=67.4

Q ss_pred             HHHHHHHHHH---HHHCCCCCCEEEEEECHHHHHHHHHHHCCCCHHEEEECCCCCCCCC-----------CCCC------
Q ss_conf             9999989999---8623546740588872036878764503862133012275744333-----------2223------
Q gi|254781093|r   83 SDAAAALDWV---QSLNPESKSCWIAGYSFGAWISMQLLMRRPEINGFISVAPQPKSYD-----------FSFL------  142 (225)
Q Consensus        83 ~D~~aa~~~l---~~~~~~~~~i~l~G~S~Gg~val~~a~~~p~i~~~v~isp~~~~~~-----------~~~l------  142 (225)
T Consensus        41 ~d~~~ll~ev~k~i~~~~d~~~l-iiGssLGGyyA~~l~~~~~-~Ka-VliNPal~P~~~m~~~i~~peey~di~~k~v~  117 (179)
T PRK04940         41 HDMQHLLKEVDKMLQLSDDERPL-ICGVGLGGYWAERIGFLCG-IRQ-VIFNPNLFPEENMEGKIDRPEEYADIATKCVT  117 (179)
T ss_pred             HHHHHHHHHHHHHHHHCCCCCCE-EEECCCHHHHHHHHHHHCC-CCE-EEECCCCCHHHHHHHHHCCCCHHHHHHHHHHH
T ss_conf             20999999999999835878837-9954723899999999829-867-99889988046556550787126888887899


Q ss_pred             ---CCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf             ---433477377616865502899999999998607799607999787984755858999999999999
Q gi|254781093|r  143 ---APCPSSGLIINGSNDTVATTSDVKDLVNKLMNQKGISITHKVIPDANHFFIGKVDELINECAHYLD  208 (225)
Q Consensus       143 ---~~~~~p~LiIhG~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~i~ga~H~f~~~~~~l~~~i~~fl~  208 (225)
T Consensus       118 ~fr~kn~~~~LvlL~~gDEVLD~~~~a---~~l~~~----~~Ii~d~gg~H~F~~-~~~~L~~I~~F~~  178 (179)
T PRK04940        118 NFREKNRDRCLVILSRNDEVLDSQRTA---EELHPY----YEIVWDEEQTHKFKN-ISPHLQRIKAFKT  178 (179)
T ss_pred             HHHHCCCCCEEEEEECCCHHHHHHHHH---HHHCCC----CEEEECCCCCCCCCC-HHHHHHHHHHHHC
T ss_conf             986128303899985562666099999---984546----358862899867651-9999899998751