HHsearch alignment for GI: 254781093 and conserved domain: PRK06489
>PRK06489 hypothetical protein; Provisional.
Probab=98.80 E-value=1.8e-07 Score=65.00 Aligned_cols=176 Identities=19% Similarity=0.181 Sum_probs=102.4
Q ss_pred CCEEEEECCCCCCCCCCCC---HH----HHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCH------HHHHHHHHHHH
Q ss_conf 8799995789988889989---99----99999999973984999853155887677852102------38999998999
Q gi|254781093|r 25 APIALILHPHPRFGGTMND---NI----VYQLFYLFQQRGFVSLRFNFRGIGRSEGEFDYGDG------ELSDAAAALDW 91 (225)
Q Consensus 25 ~~~vv~~Hp~p~~GG~~~~---~~----~~~la~~l~~~G~~vl~fd~RG~G~S~G~~~~g~~------E~~D~~aa~~~ 91 (225)
T Consensus 69 ~NaVLv~H~~---~g~~~~~~~~g~w~~liGpG~~lDt~kyfiI~~n~lG~g~Ss~-Ps~~~~~~FP~~ti~D~V~aQ~~ 144 (358)
T PRK06489 69 DNAVLVLHGT---GGSGKSFLSPTFAGELFGPGQPLDATKYYIILPDGIGHGKSSK-PSDGLRAKFPRYDYADMVEAQYR 144 (358)
T ss_pred CCEEEEEECC---CCCCCCCCCCCCHHHCCCCCCCCCCCCEEEEEECCCCCCCCCC-CCCCCCCCCCEEEHHHHHHHHHH
T ss_conf 7659998257---7874436898608864579988788866999835888999999-99888889983222578999999
Q ss_pred HHHHCCCCCC-EEEEEECHHHHHHHHHHHCCCC-HHEEEECCCCC-CC----------------CC--------------
Q ss_conf 9862354674-0588872036878764503862-13301227574-43----------------33--------------
Q gi|254781093|r 92 VQSLNPESKS-CWIAGYSFGAWISMQLLMRRPE-INGFISVAPQP-KS----------------YD-------------- 138 (225)
Q Consensus 92 l~~~~~~~~~-i~l~G~S~Gg~val~~a~~~p~-i~~~v~isp~~-~~----------------~~-------------- 138 (225)
T Consensus 145 Ll~e~lgI~~l~~v~G~SmGgmqa~~Wa~~yPd~v~~~ipia~~p~~~s~~N~~~~e~~~~aI~~DP~w~~G~Y~~qP~~ 224 (358)
T PRK06489 145 LVTEGLGVKHLRLILGTSMGGMHAWVWGERYPDFMDALMPMASQPVEMSGRNWMWRRMLIDAIRNDPDWNGGNYTTQPRA 224 (358)
T ss_pred HHHHHCCCCEEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHH
T ss_conf 99876298668656325788899999998796898745631057442208779999999999861955458857768266
Q ss_pred ---------------------------------------------------------C---CCCCCCCCCEEEEECCCCC
Q ss_conf ---------------------------------------------------------2---2234334773776168655
Q gi|254781093|r 139 ---------------------------------------------------------F---SFLAPCPSSGLIINGSNDT 158 (225)
Q Consensus 139 ---------------------------------------------------------~---~~l~~~~~p~LiIhG~~D~ 158 (225)
T Consensus 225 gl~aa~m~~~~t~~s~~~~q~~~ptr~~~d~~vd~~~~~~~~~DANd~Ly~~kAs~~yDp~~~L~~IkA~vLvI~~a~D~ 304 (358)
T PRK06489 225 MKRANTAFGIATGGGTLAYQKQAPTRAAADKAVDERLAAPVTADANDFLYQWDSSRDYNPSPDLEKIKAPVLAVNSADDE 304 (358)
T ss_pred HHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHCCCCEEEEECCCCC
T ss_conf 99999999999814899998758716677899999874333678116999987527479635586473358998565546
Q ss_pred CCCHHHHH--HHHHHHHHCCCCCEEEEEECC----CCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 02899999--999998607799607999787----9847558589999999999997
Q gi|254781093|r 159 VATTSDVK--DLVNKLMNQKGISITHKVIPD----ANHFFIGKVDELINECAHYLDN 209 (225)
Q Consensus 159 ~vp~~~~~--~~~~~l~~~~~~~~~~~~i~g----a~H~f~~~~~~l~~~i~~fl~~ 209 (225)
T Consensus 305 ~fPPE~g~~e~~~~~v~~-----~~~~~ip~~~~t~GH~t~~~~~~~~~~L~~~L~~ 356 (358)
T PRK06489 305 RNPPELGVMEAALKRVKN-----GRLVLIPASDETRGHGTTGNAKFWKAYLAELLAQ 356 (358)
T ss_pred CCCHHHHHHHHHHHHCCC-----CEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHC
T ss_conf 288203058999974769-----6499955776746776665767899999999841