HHsearch alignment for GI: 254781093 and conserved domain: pfam03959

Probab=98.80  E-value=1.2e-06  Score=60.08  Aligned_cols=112  Identities=21%  Similarity=0.219  Sum_probs=69.4

Q ss_pred             HHHHHHHHHHHHHHHCC-CCCCEEEEEECHHHHHHHHHHH---------CCCCHHEEEECCCCCCC-CCC---CCCCCCC
Q ss_conf             38999998999986235-4674058887203687876450---------38621330122757443-332---2234334
Q gi|254781093|r   81 ELSDAAAALDWVQSLNP-ESKSCWIAGYSFGAWISMQLLM---------RRPEINGFISVAPQPKS-YDF---SFLAPCP  146 (225)
Q Consensus        81 E~~D~~aa~~~l~~~~~-~~~~i~l~G~S~Gg~val~~a~---------~~p~i~~~v~isp~~~~-~~~---~~l~~~~  146 (225)
T Consensus        80 ~~~~~~~sl~~l~~~i~~~gPfdGIlGFSQGa~la~~l~~~~~~~~~~~~~p~~kfaI~~sG~~~~~~~~~~~~~~~~i~  159 (210)
T pfam03959        80 EYRGLDESLDYVRDYIKENGPFDGILGFSQGAALAAILASLLEEGLPLTDHPPLKFAILISGFRPREPKYAEFYTEPPIQ  159 (210)
T ss_pred             CCCCHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCHHHHHCCCCCCCC
T ss_conf             32799999999999998549924897514668999999999985156567998029999626888973330012467778


Q ss_pred             CCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHH
Q ss_conf             773776168655028999999999986077996079997879847558589
Q gi|254781093|r  147 SSGLIINGSNDTVATTSDVKDLVNKLMNQKGISITHKVIPDANHFFIGKVD  197 (225)
Q Consensus       147 ~p~LiIhG~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~i~ga~H~f~~~~~  197 (225)
T Consensus       160 iPtlHi~G~~D~~v~~~~s~~L~~~~~~~----~~v-~~H~gGH~vP~~~~  205 (210)
T pfam03959       160 TPSLHVIGELDTVVPEERSRKLAEACKNS----ATV-LEHPGGHFVPNKKP  205 (210)
T ss_pred             CCEEEEEECCCCCCCHHHHHHHHHHCCCC----CEE-EECCCCCCCCCCHH
T ss_conf             75489981898777769999999972899----689-97399884979736