HHsearch alignment for GI: 254781093 and conserved domain: pfam05677

>pfam05677 DUF818 Chlamydia CHLPS protein (DUF818). This family consists of several Chlamydia CHLPS proteins, the function of which are unknown.
Probab=98.58  E-value=7.5e-07  Score=61.26  Aligned_cols=138  Identities=17%  Similarity=0.256  Sum_probs=84.9

Q ss_pred             EEECCCCCCCCEEEEECCCCCCCCCCCCHHHHH-----HHHHHHHCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf             996688877879999578998888998999999-----999999739849998531558876778521023899999899
Q gi|254781093|r   16 RYQPSTNPNAPIALILHPHPRFGGTMNDNIVYQ-----LFYLFQQRGFVSLRFNFRGIGRSEGEFDYGDGELSDAAAALD   90 (225)
Q Consensus        16 ~~~~~~~~~~~~vv~~Hp~p~~GG~~~~~~~~~-----la~~l~~~G~~vl~fd~RG~G~S~G~~~~g~~E~~D~~aa~~   90 (225)
T Consensus       128 ~I~~p~A~~dRWmLiSlGn---s~~lE~ra~~~~~dd~~~~~Ak~~~sNiLVfNYPGVmsS~G~~sr-~~l~kayqacvr  203 (364)
T pfam05677       128 EICLPQAPPDRWMLISLGN---SDCLEERAMIGLKKSSWQRLAKLIGANILVFNYPGVMSSTGSITR-ENLAKAYQACVR  203 (364)
T ss_pred             EEECCCCCCCCEEEEECCC---CHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCH-HHHHHHHHHHHH
T ss_conf             7766889986069997478---146654788825756999999974688899807862257898898-999999999999


Q ss_pred             HHHHH--CCCCCCEEEEEECHHHHHHHHHHHCCCC-----HHEEE-------ECCCCCCC--------------CC---C
Q ss_conf             99862--3546740588872036878764503862-----13301-------22757443--------------33---2
Q gi|254781093|r   91 WVQSL--NPESKSCWIAGYSFGAWISMQLLMRRPE-----INGFI-------SVAPQPKS--------------YD---F  139 (225)
Q Consensus        91 ~l~~~--~~~~~~i~l~G~S~Gg~val~~a~~~p~-----i~~~v-------~isp~~~~--------------~~---~  139 (225)
T Consensus       204 yLrD~~~Gp~AkqII~YGySlG~~vQa~AL~~~~~dgsdg~~w~~VKdR~p~sl~~~A~~~~~~ig~~~~kl~gW~i~s~  283 (364)
T pfam05677       204 YLRDKEQGPGAKQIIAYGYSLGGLVQAEALSKEVIDGSDGTSWIVVKDRGPRSLAAVANQFCGPIGKLIARLFGWNIDSV  283 (364)
T ss_pred             HHHCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf             97537668873014541124105788888743875477882599994688531788999987368999999862554530


Q ss_pred             CCCCCCCCCEEEEECCCC
Q ss_conf             223433477377616865
Q gi|254781093|r  140 SFLAPCPSSGLIINGSND  157 (225)
Q Consensus       140 ~~l~~~~~p~LiIhG~~D  157 (225)
T Consensus       284 k~S~~L~cPEifiy~~D~  301 (364)
T pfam05677       284 KRSEDLPCPEIFIYGTDS  301 (364)
T ss_pred             CCCCCCCCCEEEEECCCC
T ss_conf             002568897489855876