HHsearch alignment for GI: 254781093 and conserved domain: pfam05677
>pfam05677 DUF818 Chlamydia CHLPS protein (DUF818). This family consists of several Chlamydia CHLPS proteins, the function of which are unknown.
Probab=98.58 E-value=7.5e-07 Score=61.26 Aligned_cols=138 Identities=17% Similarity=0.256 Sum_probs=84.9
Q ss_pred EEECCCCCCCCEEEEECCCCCCCCCCCCHHHHH-----HHHHHHHCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 996688877879999578998888998999999-----999999739849998531558876778521023899999899
Q gi|254781093|r 16 RYQPSTNPNAPIALILHPHPRFGGTMNDNIVYQ-----LFYLFQQRGFVSLRFNFRGIGRSEGEFDYGDGELSDAAAALD 90 (225)
Q Consensus 16 ~~~~~~~~~~~~vv~~Hp~p~~GG~~~~~~~~~-----la~~l~~~G~~vl~fd~RG~G~S~G~~~~g~~E~~D~~aa~~ 90 (225)
T Consensus 128 ~I~~p~A~~dRWmLiSlGn---s~~lE~ra~~~~~dd~~~~~Ak~~~sNiLVfNYPGVmsS~G~~sr-~~l~kayqacvr 203 (364)
T pfam05677 128 EICLPQAPPDRWMLISLGN---SDCLEERAMIGLKKSSWQRLAKLIGANILVFNYPGVMSSTGSITR-ENLAKAYQACVR 203 (364)
T ss_pred EEECCCCCCCCEEEEECCC---CHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCH-HHHHHHHHHHHH
T ss_conf 7766889986069997478---146654788825756999999974688899807862257898898-999999999999
Q ss_pred HHHHH--CCCCCCEEEEEECHHHHHHHHHHHCCCC-----HHEEE-------ECCCCCCC--------------CC---C
Q ss_conf 99862--3546740588872036878764503862-----13301-------22757443--------------33---2
Q gi|254781093|r 91 WVQSL--NPESKSCWIAGYSFGAWISMQLLMRRPE-----INGFI-------SVAPQPKS--------------YD---F 139 (225)
Q Consensus 91 ~l~~~--~~~~~~i~l~G~S~Gg~val~~a~~~p~-----i~~~v-------~isp~~~~--------------~~---~ 139 (225)
T Consensus 204 yLrD~~~Gp~AkqII~YGySlG~~vQa~AL~~~~~dgsdg~~w~~VKdR~p~sl~~~A~~~~~~ig~~~~kl~gW~i~s~ 283 (364)
T pfam05677 204 YLRDKEQGPGAKQIIAYGYSLGGLVQAEALSKEVIDGSDGTSWIVVKDRGPRSLAAVANQFCGPIGKLIARLFGWNIDSV 283 (364)
T ss_pred HHHCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 97537668873014541124105788888743875477882599994688531788999987368999999862554530
Q ss_pred CCCCCCCCCEEEEECCCC
Q ss_conf 223433477377616865
Q gi|254781093|r 140 SFLAPCPSSGLIINGSND 157 (225)
Q Consensus 140 ~~l~~~~~p~LiIhG~~D 157 (225)
T Consensus 284 k~S~~L~cPEifiy~~D~ 301 (364)
T pfam05677 284 KRSEDLPCPEIFIYGTDS 301 (364)
T ss_pred CCCCCCCCCEEEEECCCC
T ss_conf 002568897489855876