HHsearch alignment for GI: 254781093 and conserved domain: pfam12048
>pfam12048 DUF3530 Protein of unknown function (DUF3530). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=99.23 E-value=3.3e-09 Score=75.42 Aligned_cols=201 Identities=15% Similarity=0.184 Sum_probs=141.0
Q ss_pred EEECCCCCEEEEEEECCCC-CCCCEEEEECCCCCCCCCCCCH-HHHHHHHHHHHCCCEEEEEEECCC-CC----------
Q ss_conf 8965899618799966888-7787999957899888899899-999999999973984999853155-88----------
Q gi|254781093|r 4 VVFNGPSGRLEGRYQPSTN-PNAPIALILHPHPRFGGTMNDN-IVYQLFYLFQQRGFVSLRFNFRGI-GR---------- 70 (225)
Q Consensus 4 v~i~g~~G~l~~~~~~~~~-~~~~~vv~~Hp~p~~GG~~~~~-~~~~la~~l~~~G~~vl~fd~RG~-G~---------- 70 (225)
T Consensus 58 ~~L~~g~~~flaL~~p~~~~~~~GavIil~---~~g~~adwp~~i~~LR~~L~~~GW~TLSit~P~~~~~~~p~~~~~~~ 134 (294)
T pfam12048 58 KWLDAGDEKFLALWRPANTGKPQGAVIILP---DTGETADWPGLIAPLRRELPDAGWATLSLTPPDPPSAAPPNRPTEAE 134 (294)
T ss_pred HHHHCCCEEEEEEEECCCCCCCCCEEEEEC---CCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCC
T ss_conf 033159845666761301788750599955---89989984768999997565038437874379876445776667764
Q ss_pred ---CCC--CCCC-CC-------HH--HHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHCCC--CHHEEEECCCC
Q ss_conf ---767--7852-10-------23--89999989999862354674058887203687876450386--21330122757
Q gi|254781093|r 71 ---SEG--EFDY-GD-------GE--LSDAAAALDWVQSLNPESKSCWIAGYSFGAWISMQLLMRRP--EINGFISVAPQ 133 (225)
Q Consensus 71 ---S~G--~~~~-g~-------~E--~~D~~aa~~~l~~~~~~~~~i~l~G~S~Gg~val~~a~~~p--~i~~~v~isp~ 133 (225)
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~l~ari~a~~~~~~~~~--~~~ivll~~G~gA~~a~~~l~~~~~~~~daLV~I~~~ 212 (294)
T pfam12048 135 EVTKAGAKQLSSPSNEELLEAQEERLFARLEALIAFAQQYG--GKNIVLLGQGTGAGWAIRYLAQKPSPAPDALVLISAY 212 (294)
T ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--CCEEEEEEECCCHHHHHHHHHHCCCCCCCEEEEEECC
T ss_conf 45676666667743445525679999999999999997578--8448999827718999999982898779869998178
Q ss_pred CCCCCC-----CCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 443332-----223433477377616865502899999999998607799607999787984755858999999999999
Q gi|254781093|r 134 PKSYDF-----SFLAPCPSSGLIINGSNDTVATTSDVKDLVNKLMNQKGISITHKVIPDANHFFIGKVDELINECAHYLD 208 (225)
Q Consensus 134 ~~~~~~-----~~l~~~~~p~LiIhG~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~i~ga~H~f~~~~~~l~~~i~~fl~ 208 (225)
T Consensus 213 ~p~~~~~~~L~~~la~l~iPvLDiy~~~~~~~~~~~a~~R~~~a~r~~~~~Y~Q~~L~~~~~~~~~~~-~l~~rI~Gwl~ 291 (294)
T pfam12048 213 SPQSDLNKALAEQLAQLALPVLDIYSADGNPASLQAAKQRKQAAKRAKKLDYRQIQLPLLPGNPSAWQ-ELLRRIRGWLK 291 (294)
T ss_pred CCCCCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHH-HHHHHHHHHHH
T ss_conf 98643255289887406887687566889989998699999999754899857866446889837899-99999999886
Q ss_pred HH
Q ss_conf 73
Q gi|254781093|r 209 NS 210 (225)
Q Consensus 209 ~~ 210 (225)
T Consensus 292 ~~ 293 (294)
T pfam12048 292 RL 293 (294)
T ss_pred HC
T ss_conf 12