HHsearch alignment for GI: 254781094 and conserved domain: PRK01233
>PRK01233 glyS glycyl-tRNA synthetase subunit beta; Validated.
Probab=100.00 E-value=0 Score=1716.76 Aligned_cols=664 Identities=39% Similarity=0.671 Sum_probs=643.8
Q ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCEEEEEECCCCCCCCCEEEEECCCCC-----
Q ss_conf 984016400201698999999999999999999976998033588630745899984954207510023027898-----
Q gi|254781094|r 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGPRV----- 75 (702)
Q Consensus 1 M~~lLlEIgtEElPa~~~~~~~~~l~~~~~~~l~~~~l~~~~i~~~~TPRRLav~i~~l~~~q~d~~~e~kGP~~----- 75 (702)
T Consensus 1 m~~lLlEIgtEElPa~~~~~a~~~l~~~~~~~l~~~~l~~~~i~~~~TPRRLav~v~~l~~~q~d~~~e~kGP~v~~afd 80 (687)
T PRK01233 1 MKDLLLELGTEELPAKALRKLAEQLAEKVTAELEEAGLSFEEIKVFATPRRLALLVEGLAEKQPDREEEKKGPAVKIAFD 80 (687)
T ss_pred CCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCEEEEEECCCCCCCCCHHHEEECCCHHHHCC
T ss_conf 96413415342478899999999999999999998799878606998587878887586311866133413764777547
Q ss_pred --CCCCHHHHHHHHHCCCCHHHHHHEEEECCCEEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCE
Q ss_conf --589878998999779982443320340698289999991588509999999999998628985131037765676741
Q gi|254781094|r 76 --GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAF 153 (702)
Q Consensus 76 --g~pt~A~~GF~ks~gi~~~~~~~i~~~~~kg~~~~~~~~~~g~~~~eiL~~ii~~~i~~l~~pKsMrWg~~~~~~~~~ 153 (702)
T Consensus 81 ~~G~ptkA~~GF~k~~gi~~-~dL~-~~~~~kgey~~~~~~~kg~~~~elL~~ii~~~i~~l~~pKsMRWg~~~-----~ 153 (687)
T PRK01233 81 ADGKPTKAAEGFARGQGITV-DDLE-RRETKKGEYLFYRKEVPGRPTKELLPEIVPEALAKLPIPKSMRWGNND-----L 153 (687)
T ss_pred CCCCCCHHHHHHHHHCCCCH-HHCE-EEECCCEEEEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC-----C
T ss_conf 67895399999999879999-9917-787199729999985688429999999999999769998300279999-----8
Q ss_pred EEEEECCEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEECHHHHHHHHCCCCEEECHHHHHHHHHHHHH
Q ss_conf 66530320567863677787231024458221111022344577856631679999862027847169999999999999
Q gi|254781094|r 154 SWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 (702)
Q Consensus 154 ~FvRPirwIvaLl~~~~~~~~vi~~~~~gi~s~n~T~GHRf~~~~~i~I~~a~~Y~~~L~~~~Vi~d~~~R~~~I~~~i~ 233 (702)
T Consensus 154 ~F~RPIrwIvaLl-----d~~vi~~~~~gi~s~~~t~GHRfl~~~~i~I~~~~~Y~~~L~~~~Vivd~~eRk~~I~~~i~ 228 (687)
T PRK01233 154 RFVRPVHWLVALL-----GDEVIPFEILGIKSGRVTRGHRFLGPGEFTIDNADDYEEKLREAFVIADPEERKAIILAQIE 228 (687)
T ss_pred EEECHHHHHHHHC-----CCEEEEEEEEEEECCCEECCCCCCCCCCEEECCHHHHHHHHHHCCEECCHHHHHHHHHHHHH
T ss_conf 5545279898870-----88167899951452541125534688885518999999998519898369999999999999
Q ss_pred HHHHHCCCEECCCHHHHHHHHHHCCCCEEEEEEECHHHHCCCHHHHHHHHHHHCCCEEEECCCCCCCCEEEEEECCCCCC
Q ss_conf 98885398214666788788744089846888307777128989999999840011365536886132489850577655
Q gi|254781094|r 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASD 313 (702)
Q Consensus 234 ~~a~~~~~~~~~d~~Ll~Ev~~LvE~P~~~~G~F~~~fL~lP~evl~~~m~~hQkyf~~~~~~g~l~~~Fi~v~N~~~~~ 313 (702)
T Consensus 229 ~~a~~~~~~~~~d~~Ll~Ev~~LvE~P~~~~g~f~~~fL~lP~evl~~~m~~hQkyf~~~~~~g~l~~~Fi~vsN~~~~~ 308 (687)
T PRK01233 229 ELAAANGGEADIDEDLLEEVTNLVEWPVVLLGSFEEKFLEVPQEVLITTMKEHQKYFPVRDQAGKLLPNFITVSNIESKD 308 (687)
T ss_pred HHHHHCCCEECCCHHHHHHHHHHCCCCEEEEECCCHHHHCCCHHHHHHHHHHHHHHEEEECCCCCEEEEEEEEECCCCCC
T ss_conf 99998696786888999999863678857885338998429989999999973531257889998832478860688667
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEHHHHHHHHHHHHHHH
Q ss_conf 43024567889978764225999850300011111111110011220137889988421002303134551389989899
Q gi|254781094|r 314 GGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRI 393 (702)
Q Consensus 314 ~~~~v~~GnerVl~ARL~DA~FF~~~D~~~~~~~~~~~~~~~~~~~dlk~~L~~~~~~L~~~~v~F~~~LGs~~dK~~Ri 393 (702)
T Consensus 309 -~~~I~~GNErVL~ARL~DA~FF~~~D--------------------~k~~L~~~~~~L~--~v~F~~~LGsl~dK~~Ri 365 (687)
T PRK01233 309 -PENIIKGNEKVLRARLSDAEFFFKED--------------------LKKPLEDRLPKLE--NVTFHEKLGTLADKVERI 365 (687)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHH--------------------CCCCHHHHHHHHH--HEEHHHCCCCHHHHHHHH
T ss_conf -78889839999998862369999741--------------------5788788888753--033055137799999999
Q ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCHH
Q ss_conf 99999988652999889999999742367888984034578999999986236998899999997344776777886358
Q gi|254781094|r 394 RVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 (702)
Q Consensus 394 ~~la~~la~~l~~~~~~~~rAa~L~KaDL~t~mV~EFpeLQG~mG~~YA~~~ge~~~Va~aI~ehY~P~~~~d~lP~~~~ 473 (702)
T Consensus 366 ~~la~~ia~~l~~~~~~~~rAa~L~KaDL~T~mV~EFPELQGiMG~~YA~~~Ge~~~Va~AI~EhY~P~~~~d~lP~~~~ 445 (687)
T PRK01233 366 RALAGYIAPQIGADVALAARAALLAKADLVTEMVGEFPELQGIMGEYYARLDGEDEAVALAIEEHYLPRFAGDELPSTPV 445 (687)
T ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCHH
T ss_conf 99999999874978999999999986121323450538776789999999869997899999998289999999999789
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH---------------HHHHHHH
Q ss_conf 8999999749989876510567687769688887434468999837997887896303---------------6499999
Q gi|254781094|r 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---------------QNLILFF 538 (702)
Q Consensus 474 g~ilsiaDKlDtl~g~f~ig~~PTGS~DPfaLRR~a~GiirIl~e~~l~l~l~~li~~---------------~~l~~Fi 538 (702)
T Consensus 446 g~ilsiADKlDtL~g~f~ig~~PTGS~DPfaLRR~a~GiirIi~~~~~~l~l~~li~~~~~~~~~~~~~~~~~~~l~~F~ 525 (687)
T PRK01233 446 GAAVALADKLDTLVGIFGIGLIPTGSKDPFALRRAALGVLRILLEKGLPLDLVELLEEAVALYGDKLTNANVADDVLDFF 525 (687)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
T ss_conf 89999999998999999558865899981888999989999999638999899999999998644135445799999999
Q ss_pred HHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH
Q ss_conf 99999987633888789988541689998999999999999871951388999999999985565312467777738568
Q gi|254781094|r 539 HDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQY 618 (702)
Q Consensus 539 ~~Rl~~~L~e~G~~~DiI~AVl~~~~~~~~~i~~r~~aL~~f~~~~~~~~l~~a~KRv~NIL~~~~k~~~~~~~~vd~~L 618 (702)
T Consensus 526 ~~Rl~~~l~~~g~~~dii~AVl~~~~~~~~~~~~r~~aL~~~~~~~~~~~l~~a~kRv~NIl~k~~~---~~~~~vd~~L 602 (687)
T PRK01233 526 LDRLRALLQDEGIRVDVIDAVLARRPTDLLDFDARVEALQAFRTLPEAEALAAANKRVSNILKKAEG---KLSGAVDPSL 602 (687)
T ss_pred HHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC---CCCCCCCHHH
T ss_conf 9999999873799999999998079999999999999999987593289999999999999861666---5678759677
Q ss_pred HCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCH
Q ss_conf 35989999999999999999998502538999999985327888751027036886899999999999999999860684
Q gi|254781094|r 619 LLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 (702)
Q Consensus 619 f~~~~Ek~L~~~~~~~~~~i~~~l~~~dy~~~L~~L~~L~~~Id~FFDnVmVm~eD~~IR~NRL~LL~~i~~~f~~iaDf 698 (702)
T Consensus 603 f~~~~E~~L~~~~~~~~~~~~~~~~~~~y~~~l~~L~~L~~~Id~FFD~VmVm~~d~~iR~NRL~LL~~i~~lf~~iaDf 682 (687)
T PRK01233 603 FEEDAEKALYEALQALRPAVQPAFAAGDYQAALEALAALRPPVDAFFDNVMVMAEDEALRANRLALLSKLRELFLKVADI 682 (687)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHHHHHHHCCH
T ss_conf 37999999999999999999988754359999999997404899984889773898899999999999999999875275
Q ss_pred HHCC
Q ss_conf 5219
Q gi|254781094|r 699 QKIV 702 (702)
Q Consensus 699 s~Lv 702 (702)
T Consensus 683 S~L~ 686 (687)
T PRK01233 683 SLLQ 686 (687)
T ss_pred HHHC
T ss_conf 8406