HHsearch alignment for GI: 254781094 and conserved domain: smart00471
>smart00471 HDc Metal dependent phosphohydrolases with conserved 'HD' motif. Includes eukaryotic cyclic nucleotide phosphodiesterases (PDEc). This profile/HMM does not detect HD homologues in bacterial glycine aminoacyl-tRNA synthetases (beta subunit).
Probab=93.18 E-value=0.67 Score=25.28 Aligned_cols=106 Identities=24% Similarity=0.165 Sum_probs=68.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHHHHHHHHH-----CC--HHHHHHHHHHHHHHCCCCHHHHH--
Q ss_conf 13899898999999998865299-9889999999742367888984-----03--45789999999862369988999--
Q gi|254781094|r 384 GTQGERVSRIRVLGKKIAQLIDA-DVALVDRAIVLSKADLCTEIVR-----EF--PELQGKIGKEYAVLQNENISCCD-- 453 (702)
Q Consensus 384 Gs~~dK~~Ri~~la~~la~~l~~-~~~~~~rAa~L~KaDL~t~mV~-----EF--peLQG~mG~~YA~~~ge~~~Va~-- 453 (702)
T Consensus 3 ~~~~~Hs~~Va~la~~la~~~~~~~~~~l~~aaLlH--DiGk~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~ 80 (124)
T smart00471 3 YHVFEHSLRVAQLAAALAEELGLLDIELLLLAALLH--DIGKPGTPDSFLVKTSVLEDHHFIGAEILLEEEEPRILEEIL 80 (124)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH--HHHCCCCCHHHHHCHHHHHHHHHHHHHHHHCCCCCHHHHHHH
T ss_conf 049999999999999999992988499999999998--752446999998360988786999999998187547899999
Q ss_pred --HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf --99997344776777886358899999974998987651
Q gi|254781094|r 454 --AIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWA 491 (702)
Q Consensus 454 --aI~ehY~P~~~~d~lP~~~~g~ilsiaDKlDtl~g~f~ 491 (702)
T Consensus 81 ~~~i~~Hh~~~~g~~~~~i~~~~~i~~~aD~~da~~~~~~ 120 (124)
T smart00471 81 ATAILSHHERPDGLRGEPITLEARIVKVADRLDALRRDRR 120 (124)
T ss_pred HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC
T ss_conf 9999963798899987875878788764039777607999