HHsearch alignment of GI: 254781094 and MMDB domain: 3b57_A_
>3b57_A (A:) LIN1889 protein; Q92AN1, X-RAY, NESG, structural genomics, PSI-2, protein structure initiative; 3.00A {Listeria innocua CLIP11262}
Probab=97.67 E-value=0.0018 Score=42.47 Aligned_cols=183 Identities=11% Similarity=0.010 Sum_probs=124.5
Q ss_pred CHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
Q ss_conf 88998842100230313455138998989999999988652999889999999742367888984034578999999986
Q gi|254781094|r 364 PLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAV 443 (702)
Q Consensus 364 ~L~~~~~~L~~~~v~F~~~LGs~~dK~~Ri~~la~~la~~l~~~~~~~~rAa~L~KaDL~t~mV~EFpeLQG~mG~~YA~ 443 (702)
.+.+++..+.+. ..=+..-++.+.-+.|+..++..++..++.+.+.+..||.|. |+-.....+.-+..-.+...|+.
T Consensus 5 ~~~~~~~~~~~~-~~~~~~~~~~~~Hs~~Va~~a~~ia~~lg~d~~~l~~AalLH--DiGk~~~~~~~~~~~~~~~~~~~ 81 (209)
T 3b57_A 5 EIILSAKNWXHS-HFENETTGHDWSHIKRVWKLSKEIQSKEGGDLFTIELAALFH--DYSDIKLTTDEQEATKTLINWXE 81 (209)
T ss_dssp HHHHHHHHHHHT-TC------CCHHHHHHHHHHHHHHHHHHCSCHHHHHHHHHHT--TCCC-------CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-HHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHC--CCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 999999999999-844799887989999999999999988599899999999975--41334578745566899999998
Q ss_pred HCCCC----HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH-----------CCCCCCCCCCHHHHHHH
Q ss_conf 23699----8899999997344776777886358899999974998987651-----------05676877696888874
Q gi|254781094|r 444 LQNEN----ISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWA-----------INEKPSGSKDPYALRRA 508 (702)
Q Consensus 444 ~~ge~----~~Va~aI~ehY~P~~~~d~lP~~~~g~ilsiaDKlDtl~g~f~-----------ig~~PTGS~DPfaLRR~ 508 (702)
+.+.+ +.|+.+|..|..+-.....-+.+..+.++.++|++|++..... ......+..++..+...
T Consensus 82 ~~~~~~~~~~~v~~~I~~Hhe~~~g~g~p~~~~~~~i~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (209)
T 3b57_A 82 TKEIPSELIKKIIRIIQSVSFKKGKNTFKALTIEEKIVQDADRLDAIGAIGIARTFTYGGAHNREIANQNNPKNTTLQHF 161 (209)
T ss_dssp HTTCCHHHHHHHHHHHHHHC---------CCCHHHHHHHHHHHHTTSHHHHHHHHHHHHTTTTCCSCCCC-CCSCHHHHH
T ss_pred HCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHH
T ss_conf 78999999999999999877403578889757899999978888603763237899871201676557667722399999
Q ss_pred HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 34468999837997887896303649999999999987633888
Q gi|254781094|r 509 TLGIIRIILENKIDIPLSQFIEDQNLILFFHDRLKLYLHDRDIR 552 (702)
Q Consensus 509 a~GiirIl~e~~l~l~l~~li~~~~l~~Fi~~Rl~~~L~e~G~~ 552 (702)
...++++.-.... .....+. +.+..+..+.+..+..+.+..
T Consensus 162 ~~~~~~~~~~~~~--~~~~~~~-~~i~~~~~~~~~~~~~e~~~~ 202 (209)
T 3b57_A 162 YDKLLLIKDQLNT--ETAKTIA-KEKQKIXQDFIQALEKELKVL 202 (209)
T ss_dssp HHTHHHHHHHCCC--HHHHHTT-HHHHHHHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHHCCC--HHHHHHH-HHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999978877489--9999999-999999999999999997065