HHsearch results for GI: 254781094 and protein with PDBid: 1vqr_A
>1vqr_A Hypothetical protein CJ0248; 6967725, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.25A {Campylobacter jejuni subsp} SCOP: a.211.1.3
Probab=93.50 E-value=0.36 Score=25.62 Aligned_cols=85 Identities=14% Similarity=0.199 Sum_probs=61.3
Q ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 89999999862369988999999973447767778863588999999749989876510567687769688887434468
Q gi|254781094|r 434 QGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGII 513 (702)
Q Consensus 434 QG~mG~~YA~~~ge~~~Va~aI~ehY~P~~~~d~lP~~~~g~ilsiaDKlDtl~g~f~ig~~PTGS~DPfaLRR~a~Gii 513 (702)
.+.+|++.|++=|.++.+++||..|..|..+.+.. .....+|.+||-+ ++ +.+...|++.+. +...+
T Consensus 200 h~~ig~~l~~~W~lP~~i~~ai~~hh~P~~~~~~~--~~~~~~v~lA~~l---~~-------~~~~~~~~~~~~-~~~~l 266 (297)
T 1vqr_A 200 HISFLGFLLHRWNFDDVLIESICFVRTPHAAREKV--KKSAYALAITDHL---FA-------PHDGSSPFNAKA-AVALL 266 (297)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHTTTCGGGSCTTT--HHHHHHHHHHHHH---HC-------TTTTTCHHHHHH-HHHHH
T ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHCCHHHCCCCH--HHHHHHHHHHHHH---HH-------HHCCCCCCHHHH-HHHHH
T ss_conf 99999999998699999999999858985388416--7898999999999---98-------714689800667-88878
Q ss_pred HHHHHCCCCCCHHHHHHH
Q ss_conf 999837997887896303
Q gi|254781094|r 514 RIILENKIDIPLSQFIED 531 (702)
Q Consensus 514 rIl~e~~l~l~l~~li~~ 531 (702)
.-....++++++..++++
T Consensus 267 ~~~~~~~l~~~~~~l~~~ 284 (297)
T 1vqr_A 267 KEAKTQGINFDLNNLLSK 284 (297)
T ss_dssp HHHHHTTCCCCHHHHHHH
T ss_pred HHHHHHHCCCCHHHHHHH
T ss_conf 999985648879999998