HHsearch results for GI: 254781094 and protein with PDBid: 1vqr_A

>1vqr_A Hypothetical protein CJ0248; 6967725, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.25A {Campylobacter jejuni subsp} SCOP: a.211.1.3
Probab=93.50  E-value=0.36  Score=25.62  Aligned_cols=85  Identities=14%  Similarity=0.199  Sum_probs=61.3

Q ss_pred             HHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf             89999999862369988999999973447767778863588999999749989876510567687769688887434468
Q gi|254781094|r  434 QGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGII  513 (702)
Q Consensus       434 QG~mG~~YA~~~ge~~~Va~aI~ehY~P~~~~d~lP~~~~g~ilsiaDKlDtl~g~f~ig~~PTGS~DPfaLRR~a~Gii  513 (702)
                      .+.+|++.|++=|.++.+++||..|..|..+.+..  .....+|.+||-+   ++       +.+...|++.+. +...+
T Consensus       200 h~~ig~~l~~~W~lP~~i~~ai~~hh~P~~~~~~~--~~~~~~v~lA~~l---~~-------~~~~~~~~~~~~-~~~~l  266 (297)
T 1vqr_A          200 HISFLGFLLHRWNFDDVLIESICFVRTPHAAREKV--KKSAYALAITDHL---FA-------PHDGSSPFNAKA-AVALL  266 (297)
T ss_dssp             HHHHHHHHHHHTTCCHHHHHHHHTTTCGGGSCTTT--HHHHHHHHHHHHH---HC-------TTTTTCHHHHHH-HHHHH
T ss_pred             HHHHHHHHHHHCCCCHHHHHHHHHHCCHHHCCCCH--HHHHHHHHHHHHH---HH-------HHCCCCCCHHHH-HHHHH
T ss_conf             99999999998699999999999858985388416--7898999999999---98-------714689800667-88878


Q ss_pred             HHHHHCCCCCCHHHHHHH
Q ss_conf             999837997887896303
Q gi|254781094|r  514 RIILENKIDIPLSQFIED  531 (702)
Q Consensus       514 rIl~e~~l~l~l~~li~~  531 (702)
                      .-....++++++..++++
T Consensus       267 ~~~~~~~l~~~~~~l~~~  284 (297)
T 1vqr_A          267 KEAKTQGINFDLNNLLSK  284 (297)
T ss_dssp             HHHHHTTCCCCHHHHHHH
T ss_pred             HHHHHHHCCCCHHHHHHH
T ss_conf             999985648879999998