HHSEARCH alignment of GI: 254781094 and SCOP domain: d2pjqa1

Alignment
>d2pjqa1 a.211.1.1 (A:1-215) Uncharacterized protein LP2664 {Lactobacillus plantarum [TaxId: 1590]}
Probab=97.55  E-value=0.00032  Score=44.88  Aligned_cols=107  Identities=17%  Similarity=0.074  Sum_probs=74.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHH----HHHH
Q ss_conf             134551389989899999999886529998899999997423678889840345789999999862369988----9999
Q gi|254781094|r  379 FHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENIS----CCDA  454 (702)
Q Consensus       379 F~~~LGs~~dK~~Ri~~la~~la~~l~~~~~~~~rAa~L~KaDL~t~mV~EFpeLQG~mG~~YA~~~ge~~~----Va~a  454 (702)
                      -+..-|-=++-+.|+..+|..|+..-+.|...+.-||+|==+.  -.-...=|+-.+-+-.......|.+++    |+.+
T Consensus        19 ~~~~~~Hd~~H~~RV~~~A~~Ia~~e~~D~~vv~~AAlLHDig--d~k~~~~~~~~~~~~~~~L~~~~~~~~~i~~I~~i   96 (215)
T d2pjqa1          19 AHDHSGHGRDHLQRVNRLARRLAKDEGANLNLTLAAAWLHDVI--DDKLMANPAKAHQDLIVQLNAQNVTADDQTAIFAI   96 (215)
T ss_dssp             TTCCSSCSHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHH--C---------CHHHHHHHHHTTTCCHHHHHHHHHH
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHC--CCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHH
T ss_conf             4787767889999999999999988599999999999998860--10035762468999999987489898999999999


Q ss_pred             HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             999734477677788635889999997499898
Q gi|254781094|r  455 IEEHLKPRGPLENVPTNKISITVSLADKLDTLI  487 (702)
Q Consensus       455 I~ehY~P~~~~d~lP~~~~g~ilsiaDKlDtl~  487 (702)
                      |.-|.......+.-|.|..+.||.-|||||.|-
T Consensus        97 I~~~s~s~~~~~~~p~t~Ea~Iv~DADrLDalG  129 (215)
T d2pjqa1          97 IDHMSFSKSFNGPQKLSLEGQVVQDADRLDAIG  129 (215)
T ss_dssp             HTSCCTGGGGGCCCCCCSHHHHHHHHHHHTTSH
T ss_pred             HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCC
T ss_conf             985788722689998689999999999997345


SCOP domain information

class: All alpha proteins
fold: HD-domain/PDEase-like
superfamily: HD-domain/PDEase-like
family: HD domain
domain: Uncharacterized protein LP2664
species: Lactobacillus plantarum [TaxId: 1590]