HHSEARCH alignment of GI: 254781094 and SCOP domain: d2qgsa1

Alignment
>d2qgsa1 a.211.1.1 (A:1-216) Uncharacterized protein SE1688 {Staphylococcus epidermidis [TaxId: 1282]}
Probab=96.59  E-value=0.0087  Score=35.09  Aligned_cols=102  Identities=17%  Similarity=0.050  Sum_probs=70.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCH----HHHHHHHH
Q ss_conf             513899898999999998865299-9889999999742367888984034578999999986236998----89999999
Q gi|254781094|r  383 IGTQGERVSRIRVLGKKIAQLIDA-DVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENI----SCCDAIEE  457 (702)
Q Consensus       383 LGs~~dK~~Ri~~la~~la~~l~~-~~~~~~rAa~L~KaDL~t~mV~EFpeLQG~mG~~YA~~~ge~~----~Va~aI~e  457 (702)
                      -|-=++-+.|+..+|..|+..-+. +...+.-||+|==  ..-.- ...++..--+.+.+....|.++    .|+.+|..
T Consensus        23 ~~Hd~~H~~RV~~~A~~Ia~~e~~~d~~vv~~AAlLHD--igd~k-~~~e~~~a~~a~~~L~~~g~~~~~i~~I~~~I~~   99 (216)
T d2qgsa1          23 TGHDIAHVERVYNNACYIAKRENITDTLVIELSSLLHD--TVDSK-LTDEILAYDQLKQFLSTLDLSSEISQQVLYIIKH   99 (216)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHTTCSCCHHHHHHHHHTT--TTCCS-SSCHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHT
T ss_pred             CCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH--HCCCC-CCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
T ss_conf             87687999999999999998749972899999999863--03212-3432678999999998879999999999999998


Q ss_pred             HHCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             734477677788635889999997499898
Q gi|254781094|r  458 HLKPRGPLENVPTNKISITVSLADKLDTLI  487 (702)
Q Consensus       458 hY~P~~~~d~lP~~~~g~ilsiaDKlDtl~  487 (702)
                      |=.-.+.....|.|..+.||.=|||||.|-
T Consensus       100 hS~s~~~~~~~p~tle~~iv~DADrLDalG  129 (216)
T d2qgsa1         100 MSYRAGKNNHVKLSIDGEIVRDADRLDAIG  129 (216)
T ss_dssp             TC-------CCCCCHHHHHHHHHHHHTTSH
T ss_pred             HHCCCCCCCCCCCCHHHHHHHHCHHHHHCC
T ss_conf             451158888898678889998432887411


SCOP domain information

class: All alpha proteins
fold: HD-domain/PDEase-like
superfamily: HD-domain/PDEase-like
family: HD domain
domain: Uncharacterized protein SE1688
species: Staphylococcus epidermidis [TaxId: 1282]